Gene Sbal223_1909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_1909 
Symbol 
ID7090076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp2254770 
End bp2255786 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content47% 
IMG OID643460813 
ProductBNR repeat protein 
Protein accessionYP_002357837 
Protein GI217973086 
COG category[R] General function prediction only 
COG ID[COG4447] Uncharacterized protein related to plant photosystem II stability/assembly factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00042683 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.120925 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTTTC GCATCCTTCA GTGTGTTGCT GCATTAAGTT TCGGTGGCGC TTTTTTCCCT 
TCTACGTTAT CTGCAACACC CTCTGATCCG ATTTTTTCTC AAATTCAACC GCTTGCGGCT
TCATCCTTGA TTTTAGATAT TGCCAACGTG GGCACAGGCT TAGTGGCTGT GGGTGAACGC
GGTCATGTTC TAGTGTATGA CGGCAGTTGG CATCAAGTGG CGACGCCCGT AAGCTCGCAG
TTGACCAAAG TGTTTTTCCT TAATGACAAA CTCGGCTGGG CCGTGGGTCA TGATGCGACC
ATTTTACATA CTCAGGATGG TGGCCAAACT TGGCAGCAGC AGATGCATTC GCCCGAGATT
GAAAAGCCAT TCCTCGATGT AGTTTTTTTA GATGAAAACA AGGGGGTCGC CATTGGGGCT
TACGGTTTGT TTTATCGCAC TAATGATGGT GGCGCCCATT GGAGCGATGA GTTCCATGAG
GAGCTGTTAG CCGAAGAAGA TGTGTCCTAT TTAGCGGAGT TGAAAGGCAG CGATCAATCA
GCCTATGTGA GCGCACGCGC TTCATTATTG CCGCACTTTA ATCGTATTTT AACCTTGACT
GACGGACGTT TATTACTGGT CGGCGAGTTA GGCCTAGTGG CCGTTTCAAG CGATCAAGGC
CAAACCTTTG CGCGTACCAG TTTTGATTAC GATGGCTCTA TGTTTAATGC CATTGAAACG
AAAGATGCCG TGTATGTGAT GGGTCTTCGC GGTCATATAT TCAAAGCTGA CTTGAGTTTA
AGCCAGTGGA ATGAAATCGA ACTGCCAGTG CAATCTTCAA TCAATGGGGC GATGTCAGTG
TCGGACGATG CGGTTTATCT CGTGGGAAAT GCAGGGATAG TGATTAAGCT GAATGGGGAT
GATACCAGCA GTATTGTCAC TCGTCGCCAA GGGGAAAACT TAGTCTCTAT TGCGAAGGAT
AATCAAGGGA ATATGTGGTT ATCCGGCAGC CAAGGGCTGT TTATTCTTAA GCCATAA
 
Protein sequence
MSFRILQCVA ALSFGGAFFP STLSATPSDP IFSQIQPLAA SSLILDIANV GTGLVAVGER 
GHVLVYDGSW HQVATPVSSQ LTKVFFLNDK LGWAVGHDAT ILHTQDGGQT WQQQMHSPEI
EKPFLDVVFL DENKGVAIGA YGLFYRTNDG GAHWSDEFHE ELLAEEDVSY LAELKGSDQS
AYVSARASLL PHFNRILTLT DGRLLLVGEL GLVAVSSDQG QTFARTSFDY DGSMFNAIET
KDAVYVMGLR GHIFKADLSL SQWNEIELPV QSSINGAMSV SDDAVYLVGN AGIVIKLNGD
DTSSIVTRRQ GENLVSIAKD NQGNMWLSGS QGLFILKP