| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1894 |
|---|
| Symbol | |
|---|
| ID | 7090061 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 2235558 |
|---|
| End bp | 2235884 |
|---|
| Gene Length | 327 bp |
|---|
| Protein Length | 108 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643460798 |
|---|
| Product | type IV pilus biogenesis protein PilZ |
|---|
| Protein accession | YP_002357822 |
|---|
| Protein GI | 217973071 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3215] Tfp pilus assembly protein PilZ |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0727827 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTAGATC TCGTCGTTAA TTTTGATACC TTACATCAGC TATATCGTGC CTATATGCCT
TTTATTAAGC CGGCAGGATT ATTCATAGCC ACCAGTGAAG GCCATTACCT TGGCCAGCCG
CTGACGATTG CGTATCGCTT ACCGGGCGCG ACCATAACGA ATGAATTTCG CGGTGTCGTG
GTATGGATCA ATCCCTTAGG TGCTTCGGGC GGCCGTCCTG TAGGCATTGG CATTAAAATT
GTTTCTGAGC CCGATAGCCA TAAACACCAC ATCGAAAAAT TACTGTCGCG CGAACTGGCC
TCCGGCGATC TAACCTGCAC TATGTAA
|
|---|
| Protein sequence | MVDLVVNFDT LHQLYRAYMP FIKPAGLFIA TSEGHYLGQP LTIAYRLPGA TITNEFRGVV
VWINPLGASG GRPVGIGIKI VSEPDSHKHH IEKLLSRELA SGDLTCTM
|
|---|
| |