Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1748 |
Symbol | |
ID | 7088282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 2058208 |
End bp | 2058939 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 643460652 |
Product | anti-ECFsigma factor, ChrR |
Protein accession | YP_002357676 |
Protein GI | 217972925 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3806] Anti-sigma factor |
TIGRFAM ID | [TIGR02451] anti-sigma factor, putative, ChrR family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0800571 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00180975 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATTAAGC ATCATCCCCA ACAAGATTTA CTCGTGAGCC ATGCGAATGG GGTCTTACCT TTATCGATGG CCATCGCGGT ATCAGCACAT TGCGCATTGT GTGAGACGTG TCGTGAGCAA CTAGCCCTGT TAACCGAGCA AGCTGCCAAT TCGGCATTAA ATCCAGATGG CGCTCATGCT CATGCTGCAA AGCATCATAT AGACCAAGAG TCGATTCACA CTGCGCATAT TGATACTGGA AACACTCAAG CGACTAATGT ACCAGTGATG GATATTGACG CTATGCTGGC GCAAATCATG GCCCAGCCTG CGGCAACGGA TGTGCCTAAT AATGCTCATC TGGATGTTCA AGTAAAACAA CAGCATTACA CAGTGCCGTC GGTGTTTCGC CAGCATTTGG CCCGTCCTTG GCAAATCTTA GGCAAAGTCA GTCGTATGCG TTTTGATGTC GATGAAATGA ACACCCGCGC GAGCTTGTTA CACATAGATG CGCAAGGTGA AATCCCCCAA CATACCCATA AGGGCTATGA GTTAACCCTA TTGTTAGCGG GAGCGTTTTC GGATATTAAC GGTGACTATG TGCCAGGTGA TTTTATTGTG CTCGATAGCC AACATCACCA CTCACCTAAA ACCGTTGACG GTTGCTTATG CTACACAGTG TTAGATGCGC CGCTGCATTT TACCAAAGGC CTAAGCAAGT TGCTTAACCC CATAGGTGAA CTGATTTATT AA
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Protein sequence | MIKHHPQQDL LVSHANGVLP LSMAIAVSAH CALCETCREQ LALLTEQAAN SALNPDGAHA HAAKHHIDQE SIHTAHIDTG NTQATNVPVM DIDAMLAQIM AQPAATDVPN NAHLDVQVKQ QHYTVPSVFR QHLARPWQIL GKVSRMRFDV DEMNTRASLL HIDAQGEIPQ HTHKGYELTL LLAGAFSDIN GDYVPGDFIV LDSQHHHSPK TVDGCLCYTV LDAPLHFTKG LSKLLNPIGE LIY
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