Gene Sbal223_1620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_1620 
Symbol 
ID7090021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp1899154 
End bp1899642 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content45% 
IMG OID643460521 
ProductColicin V production protein 
Protein accessionYP_002357548 
Protein GI217972797 
COG category[R] General function prediction only 
COG ID[COG1286] Uncharacterized membrane protein, required for colicin V production 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0904729 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.930325 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTGGA TTGATTACGC TATCATATTC GTCATCGGAT TATCGACTCT CATCAGTCTA 
ATCCGCGGAT TCGCCAAAGA AGCCATGTCC TTAGTGGTAT GGTTCGCGGC TTTCTTTGTT
GCCAGCCAAT TTTACCAAGA TCTTGCCGTT CACTTAACTC AAATGAACGA TGAGATGCTG
CGTAATGGCG TTTCTATTGC CATCCTCTTT ATTACCACTT TGGTACTCGG CGCCTTAGTT
AACTATATTC TCGGACAACT TGTTGTCAAA ACCGGATTAT CTGGCACTGA TAGGCTCTTG
GGCCTGTGTT TCGGTGCTAT TCGAGGCGCG CTAATTGTAA GCGCCTTGCT GTTTTTTATG
GATGCTTTCA CAGGTTCACC CAACACCCAA TGGTGGAAGG ACTCTGTGCT AGTGCCCGAA
TTTGGCGTTG TCATTCAATG GTTTTTTGAC TATTTGGAAA ACACCTCCAG CTTTGTACCC
AAACTATAA
 
Protein sequence
MVWIDYAIIF VIGLSTLISL IRGFAKEAMS LVVWFAAFFV ASQFYQDLAV HLTQMNDEML 
RNGVSIAILF ITTLVLGALV NYILGQLVVK TGLSGTDRLL GLCFGAIRGA LIVSALLFFM
DAFTGSPNTQ WWKDSVLVPE FGVVIQWFFD YLENTSSFVP KL