Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1607 |
Symbol | |
ID | 7090008 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 1881915 |
End bp | 1883009 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643460508 |
Product | chorismate synthase |
Protein accession | YP_002357535 |
Protein GI | 217972784 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0082] Chorismate synthase |
TIGRFAM ID | [TIGR00033] chorismate synthase |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.131097 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.360545 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTGGAA ACAGTATTGG TCAAAATTTT GTAGTGACGA CGTTTGGTGA GAGTCACGGT GTTGCACTGG GTTGCATTAT TGATGGTTGC CCACCAGGGC TTGAATTAAC TGAAGCCGAT ATGCAGCATG ATCTTGACCG CCGTCGCCCA GGGACATCCC GATATACCAC GGCCCGCCGT GAGCCAGACG AAGTGCGGAT TTTATCCGGC GTTTTCGAGG GTAAAACCAC GGGTACCTCG ATTGGACTCT TGATTGAAAA TACCGATCAA CGCAGTCAAG ATTACTCAAA TATTAAAGAT TTATTCCGCC CTGGACACGC CGATTATACC TACCAGCAAA AGTACGGTAT GCGTGACTAT CGTGGTGGTG GCCGCTCGTC TGCCCGTGAA ACCGCGATGC GCGTTGCGGC AGGTGCGGTG GCTAAAAAGT ATTTGAAGCA AGTTCATGGT ATCGAGATCT ATGGGTTTAT GTCCCAGCTG GGTCCTATTT GTGCCGAGAC TATTGATCTT GACCAAATTG AGCAAAATGC CTTTTTCTTC CCCGATGCCA GCAAGCTTGA AGCGCTTGAT GAATACATGC GTGAGCTGAA AAAATCCGGT GACTCCATTG GCGCGAAAAT CTCCGTTATC GCGACAGGTG TGCCAGTGGG TTTAGGTGAG CCAGTATTTG ATCGATTGGA TGCTGATATC GCCCACGCGC TGATGGGCAT CAATGCCGTC AAAGGCGTTG AAATTGGTGA TGGTTTTGGC GTAGTGACTC AAAAGGGCTC CGAAGGTCGT GACTTAATGT CACCTCAAGG CTTTGAATCT AACCATGCGG GCGGTGTGCT CGGTGGAATT TCATCGGGCC AGCCGATCAT TGCCCATATT GCCTTAAAAC CCACATCAAG CATTAGTGTG CCGGGCCAAA GTATGACGGC GCAGGGTGAA ATGGCCGAAG TTGTCACTAA AGGTCGTCAC GATCCCTGTG TTGGGATCCG CGCTGTACCG ATTGCCGAAG CTATGCTTGC TATTGTGTTG ATGGATCACT TGCTAAGACA CAGAGCGCAA AATCAGGATG TACGCAGTCA CACGCCTGTG CTTGGTATGC GATAG
|
Protein sequence | MSGNSIGQNF VVTTFGESHG VALGCIIDGC PPGLELTEAD MQHDLDRRRP GTSRYTTARR EPDEVRILSG VFEGKTTGTS IGLLIENTDQ RSQDYSNIKD LFRPGHADYT YQQKYGMRDY RGGGRSSARE TAMRVAAGAV AKKYLKQVHG IEIYGFMSQL GPICAETIDL DQIEQNAFFF PDASKLEALD EYMRELKKSG DSIGAKISVI ATGVPVGLGE PVFDRLDADI AHALMGINAV KGVEIGDGFG VVTQKGSEGR DLMSPQGFES NHAGGVLGGI SSGQPIIAHI ALKPTSSISV PGQSMTAQGE MAEVVTKGRH DPCVGIRAVP IAEAMLAIVL MDHLLRHRAQ NQDVRSHTPV LGMR
|
| |