Gene Sbal223_1563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_1563 
Symbol 
ID7088253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp1830796 
End bp1831320 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content46% 
IMG OID643460464 
ProductNADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30 
Protein accessionYP_002357491 
Protein GI217972740 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.177112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.000729597 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCTTTT TTGATTTTAG CGTACTAGAT GCTGCAAAGC CCTGGTATGG AATAAATGAC 
ACTGTGATGG GCGGTTTGTC CCGCAGTAAA ATGACGGTTT CACCTTTAGG TTATGGTGAG
TTTAGTGGCC ATGTGTCGCT GGCAAATGGC GGCGGGTTTG CCTCAGTGCG CTGTGAGTTT
AGCACCATAG ATGTCAGTGA ATTTACTGGG ATTTACCTCG AACTCGATGG CGACCGAACT
AAAGACTATA AAGTGAATTT AAAGGATGTC GACACACCGC AAAGTACGGT ATATCAAGCG
CCTATGCCCA CGCCAACTCA CCAAACCTTT GGTGTGATTA GTGCCAGAGT GTTGAATTGG
CAGCGGATAG AAATTCCATT CAGTGATTTC AAGCCCCAAT GTCGGGGTAA ACCCATTTCC
CGTCCGAATA TAGTATTGAG TCAGTTGTGC AGCTTAGGGT TAGTGATTGG CGCCCAGCAA
AGTGGCGACT TTTCATTGAA AATCAGAGAA ATCGGCTACT ACTAG
 
Protein sequence
MIFFDFSVLD AAKPWYGIND TVMGGLSRSK MTVSPLGYGE FSGHVSLANG GGFASVRCEF 
STIDVSEFTG IYLELDGDRT KDYKVNLKDV DTPQSTVYQA PMPTPTHQTF GVISARVLNW
QRIEIPFSDF KPQCRGKPIS RPNIVLSQLC SLGLVIGAQQ SGDFSLKIRE IGYY