Gene Sbal223_1544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_1544 
Symbol 
ID7088234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp1805708 
End bp1806955 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content48% 
IMG OID643460445 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002357472 
Protein GI217972721 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAAGCCG TGTTAGATAC TATGATTGAT CATAAACAGC GTGATACCCG ACTGATGTGG 
GCGCTATGTG TTGCCTCTGT GGTGGTATAT ATCAACTTGT ATCTGATGCA AGGCATGCTG
CCGCTGATTG CGGGGCATTT TGCGGTATCG GGGTCTAAAG CGACGTTAAT CCTGTCGGTA
ACCAGTTTTT CTTTAGCCTT TTCATTGCTC TTGTATGCGG TACTGTCAGA CCGTATCGGT
CGACACACAC CGATTATTGT CAGCCTGTGG TTGTTGGCGT TATCTAACTT ATTGTTGATT
TGGGCACCTG ACTTTAACGG GTTAGTGCTA GTGCGATTGC TGCAAGGTGC ATTACTCGCT
GCCGTGCCAG CAATTGCGAT GGCGTACTTT AAGGAGCAGT TGTCACCGAG CACTATGCTC
AAAGCCGCGG GCATTTACAT TATGGCAAAC AGCATTGGCG GTATTGTTGG CCGTTTGCTC
GGTGGCGTTA TGTCGCAGTT TTTATCTTGG CAAGAATCCA TGTGGCTGCT GTTTTTAGTC
ACCTTAGCGG GCGTGGCTTT AGTGAACTAT TTGCTGCCTT CACTTGCTGA TGCACAGGCC
ATGTCAAAGA GTAAAACCGA GCCCTCTTTA TCAAAACGCG CCCGTTTAGC CCAAGATCTT
CATGGCTTTA GCCATCATCT CACCGATGCA CAAATGCGCT TGGTCTACGC GATTGGCGGC
CTGACCTTTA TGATGATGGT GAATCAATTT AGCTTTATTC AGCTGCATTT GATGGCGGCG
CCCTATGAAT GGAGTCGCTT TCAAGCAACC TTGATTTTTC TGTGTTATTC CAGCGGCACT
ATTGCGTCGT ATTTCACTGC GAAATGGCTC GCCAAATTTG GCCAACATAA GTTGTATCAG
TGGTCTTGGT GCGTGATGTT GCTCGGCAGT TTACTGACCC TGTTTGATAC CACTTTAACC
ATTAGCTTAG GCTTTTTGAT GACGGCTTGT GGTTTCTTCC TCACCCACAG TTGCTGTAAT
TCCTTTGTCG CGATGCGCGC CAGTCGCGAT CGGGCTAAGG CGACATCACT GTATTTATGT
TGTTATTACT TAGGCGCGGC GATTGGCGGC CCTTATTTGA TGATGTTTTG GCATGAGGCG
CAGTGGCGCG GCGTGGTAAT GGGGTCTTTA ACCTTACTGG CTTTGATTGC CTTAGCTATC
ACCCGTTTAC ATTACCATCA AACCAATGAC GTTCGTGCGC TTGCATAG
 
Protein sequence
MQAVLDTMID HKQRDTRLMW ALCVASVVVY INLYLMQGML PLIAGHFAVS GSKATLILSV 
TSFSLAFSLL LYAVLSDRIG RHTPIIVSLW LLALSNLLLI WAPDFNGLVL VRLLQGALLA
AVPAIAMAYF KEQLSPSTML KAAGIYIMAN SIGGIVGRLL GGVMSQFLSW QESMWLLFLV
TLAGVALVNY LLPSLADAQA MSKSKTEPSL SKRARLAQDL HGFSHHLTDA QMRLVYAIGG
LTFMMMVNQF SFIQLHLMAA PYEWSRFQAT LIFLCYSSGT IASYFTAKWL AKFGQHKLYQ
WSWCVMLLGS LLTLFDTTLT ISLGFLMTAC GFFLTHSCCN SFVAMRASRD RAKATSLYLC
CYYLGAAIGG PYLMMFWHEA QWRGVVMGSL TLLALIALAI TRLHYHQTND VRALA