Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1544 |
Symbol | |
ID | 7088234 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 1805708 |
End bp | 1806955 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643460445 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_002357472 |
Protein GI | 217972721 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAAGCCG TGTTAGATAC TATGATTGAT CATAAACAGC GTGATACCCG ACTGATGTGG GCGCTATGTG TTGCCTCTGT GGTGGTATAT ATCAACTTGT ATCTGATGCA AGGCATGCTG CCGCTGATTG CGGGGCATTT TGCGGTATCG GGGTCTAAAG CGACGTTAAT CCTGTCGGTA ACCAGTTTTT CTTTAGCCTT TTCATTGCTC TTGTATGCGG TACTGTCAGA CCGTATCGGT CGACACACAC CGATTATTGT CAGCCTGTGG TTGTTGGCGT TATCTAACTT ATTGTTGATT TGGGCACCTG ACTTTAACGG GTTAGTGCTA GTGCGATTGC TGCAAGGTGC ATTACTCGCT GCCGTGCCAG CAATTGCGAT GGCGTACTTT AAGGAGCAGT TGTCACCGAG CACTATGCTC AAAGCCGCGG GCATTTACAT TATGGCAAAC AGCATTGGCG GTATTGTTGG CCGTTTGCTC GGTGGCGTTA TGTCGCAGTT TTTATCTTGG CAAGAATCCA TGTGGCTGCT GTTTTTAGTC ACCTTAGCGG GCGTGGCTTT AGTGAACTAT TTGCTGCCTT CACTTGCTGA TGCACAGGCC ATGTCAAAGA GTAAAACCGA GCCCTCTTTA TCAAAACGCG CCCGTTTAGC CCAAGATCTT CATGGCTTTA GCCATCATCT CACCGATGCA CAAATGCGCT TGGTCTACGC GATTGGCGGC CTGACCTTTA TGATGATGGT GAATCAATTT AGCTTTATTC AGCTGCATTT GATGGCGGCG CCCTATGAAT GGAGTCGCTT TCAAGCAACC TTGATTTTTC TGTGTTATTC CAGCGGCACT ATTGCGTCGT ATTTCACTGC GAAATGGCTC GCCAAATTTG GCCAACATAA GTTGTATCAG TGGTCTTGGT GCGTGATGTT GCTCGGCAGT TTACTGACCC TGTTTGATAC CACTTTAACC ATTAGCTTAG GCTTTTTGAT GACGGCTTGT GGTTTCTTCC TCACCCACAG TTGCTGTAAT TCCTTTGTCG CGATGCGCGC CAGTCGCGAT CGGGCTAAGG CGACATCACT GTATTTATGT TGTTATTACT TAGGCGCGGC GATTGGCGGC CCTTATTTGA TGATGTTTTG GCATGAGGCG CAGTGGCGCG GCGTGGTAAT GGGGTCTTTA ACCTTACTGG CTTTGATTGC CTTAGCTATC ACCCGTTTAC ATTACCATCA AACCAATGAC GTTCGTGCGC TTGCATAG
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Protein sequence | MQAVLDTMID HKQRDTRLMW ALCVASVVVY INLYLMQGML PLIAGHFAVS GSKATLILSV TSFSLAFSLL LYAVLSDRIG RHTPIIVSLW LLALSNLLLI WAPDFNGLVL VRLLQGALLA AVPAIAMAYF KEQLSPSTML KAAGIYIMAN SIGGIVGRLL GGVMSQFLSW QESMWLLFLV TLAGVALVNY LLPSLADAQA MSKSKTEPSL SKRARLAQDL HGFSHHLTDA QMRLVYAIGG LTFMMMVNQF SFIQLHLMAA PYEWSRFQAT LIFLCYSSGT IASYFTAKWL AKFGQHKLYQ WSWCVMLLGS LLTLFDTTLT ISLGFLMTAC GFFLTHSCCN SFVAMRASRD RAKATSLYLC CYYLGAAIGG PYLMMFWHEA QWRGVVMGSL TLLALIALAI TRLHYHQTND VRALA
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