| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1474 |
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| Symbol | |
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| ID | 7087527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 1720196 |
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| End bp | 1720759 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 643460377 |
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| Product | TDP-4-oxo-6-deoxy-D-glucose transaminase |
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| Protein accession | YP_002357404 |
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| Protein GI | 217972653 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.844119 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.347271 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTTTTT TAACAGAAGA TCAGATTACT AAAGTAGGTT TCAAATTTCT TGGTAAGAAT
GTAAAAATTA GTGATAGATG TGTTATTTAT AATCCAGAGT TAATTGAAAT TGGAAATAAT
TCAAGAATCG ATGACTTTTG TGTTTTATCT GGTCGTATTA TAATTGGCCG AAATGTGCAT
ATTACAGTTT ATTGTAACAT TGCCGGTGGT GAACCTGGCG TGTATATCGA CAGCTATTCA
ACTGTTGCCT ATGGTTGCCA TATTATGTCG CAAAGTGATG ATTATACTGG CCAAAGTATG
ACAAATTCAA CTATTCCTAA AGAATATAAG TCTGAAATTT ATAAGGCAGT TGTTATTGGT
AAGCATGTGA TAATCGGAGC TGGTTCCATA GTATTACCTG GATGCAATAT TGAAGAAGGT
TGTTCAGTTG GCGCAATGAG TTTAGTTAAT AAACCGACAA CACCATGGGG GGTGTATTTC
GGAGTGCCTG CAAAACGTAT TAAAGAGCGT AGTAAACATT TACTAATTAA TTTTACAGAG
TATTTAAAAA ATGATTCCAT TTAA
|
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| Protein sequence | MAFLTEDQIT KVGFKFLGKN VKISDRCVIY NPELIEIGNN SRIDDFCVLS GRIIIGRNVH
ITVYCNIAGG EPGVYIDSYS TVAYGCHIMS QSDDYTGQSM TNSTIPKEYK SEIYKAVVIG
KHVIIGAGSI VLPGCNIEEG CSVGAMSLVN KPTTPWGVYF GVPAKRIKER SKHLLINFTE
YLKNDSI
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