| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1449 |
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| Symbol | fliR |
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| ID | 7087502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 1690509 |
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| End bp | 1691306 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643460352 |
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| Product | flagellar biosynthesis protein FliR |
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| Protein accession | YP_002357379 |
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| Protein GI | 217972628 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.22312 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAGCTGC TGCTCGATAC CTTAATGCAG ACCATTACCG CTTATATGTG GCCGCTATTT
CGGGTAGCTA GTATGTTAAT GGTCATGGTG GTATTTGGGG CGGCAACTAC CCCAAGCCGC
GTACGCTTAT TATTGGCGAT GGCGATTACC TTTGCGATAG CACCAGTTCT TCCTCCCGTT
CAAAATGCCG ATTTATTTTC ACTCAGCGCA GTATTTATCA CCGCGCAGCA AATTATTATT
GGTGTTGCCA TGGGGTTTGT GACTCAAATG GTGATGCAAG TTTTTGTATT AACCGGGCAG
ATTATCGGTA TGCAAACCAG TCTCGGTTTT GCCTCTATGG TGGATCCAGG TTCTGGTCAG
CAAACTCCGG TTATTGGTAA CTTTTTCCTA TTGTTGGCGA CATTGATCTT CTTAGCTGTA
GATGGCCATC TGTTGATGAT CCGTATGCTG GTGGCGAGCT TTGAGACCCT ACCCATTTCT
AATCAAGGAT TAACACTCAC TAGCTACCGT GCTCTAGCAG ATTGGGGTTC GTATATGTTT
GGTGCGGCAT TAACTATGTC GATATCCGCG ATTATCGCCC TGTTGTTAGT CAATTTGTCC
TTCGGGGTGA TGACCCGCGC CGCGCCGCAG TTAAACATTT TCTCTATCGG TTTTCCGATC
ACTATGATTG GGGGGCTGTT TATTCTTTGG TTAACCTTAA CACCAGTCAT GGAGCATTTT
GATGAAGTGT GGGCTGCGGC TCAAGTGCTG CTTTGCGATA TGTTAGCGCT TCAATGTAAC
GCCGATGGCT TGATATGA
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| Protein sequence | MELLLDTLMQ TITAYMWPLF RVASMLMVMV VFGAATTPSR VRLLLAMAIT FAIAPVLPPV
QNADLFSLSA VFITAQQIII GVAMGFVTQM VMQVFVLTGQ IIGMQTSLGF ASMVDPGSGQ
QTPVIGNFFL LLATLIFLAV DGHLLMIRML VASFETLPIS NQGLTLTSYR ALADWGSYMF
GAALTMSISA IIALLLVNLS FGVMTRAAPQ LNIFSIGFPI TMIGGLFILW LTLTPVMEHF
DEVWAAAQVL LCDMLALQCN ADGLI
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