Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1447 |
Symbol | fliP |
ID | 7087500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 1689470 |
End bp | 1690216 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643460350 |
Product | flagellar biosynthesis protein FliP |
Protein accession | YP_002357377 |
Protein GI | 217972626 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1338] Flagellar biosynthesis pathway, component FliP |
TIGRFAM ID | [TIGR01103] flagellar biosynthetic protein FliP |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.115557 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACAC GTATGCTCGC GTTAGTTGGC TTAGTTATTC TGTTATGTAT GCCGTCGGCA TGGGCTGCCG ATGGTGTTTT GCCTGCGGTT ACTGTAACAA CAGGACCTGA CGGTTCCACA GAATACTCGG TCACAATGCA GATTTTACTG TTGATGACAT CGCTGAGTTT TTTACCTGCG ATGCTCATTA TGTTGACCTC TTTCACGCGT ATTATCATAG TCCTGTCAAT ATTACGTCAA GCCATTGGGT TACAACAGAC GCCGTCTAAT CAAGTCTTAA TTGGTATGAG TTTATTCATG ACCTTCTTTA TTATGGCGCC GGTGTTTGAC CGGATTTATG ACGAAGGAGT TAAGCCTTAC ATAGAAGAGC AGTTAACCTT GCAGCAAGCG TTTGAAAAAG GCAAAGAGCC ACTCAAAGGT TTTATGTTAG GGCAAGTCAG GACCACAGAC TTAAAAACTT TTATCGAAAT TTCAGGCTAT AAGAACATTA AGTCGCCCGA AGAAGCCCCG ATGAGTGTGT TGATCCCCGC CTTTATTACC AGTGAGTTGA AAACAGCTTT TCAAATTGGC TTTATGTTGT TCGTGCCATT TTTAGTGTTA GATCTTGTTG TGGCCAGTAT CTTAATGGCC ATGGGTATGA TGATGTTATC CCCTATGATA GTGTCGCTAC CGTTTAAGAT CATGCTGTTT GTGCTCGTCG ATGGTTGGAG CTTAGTCCTA GGGACATTAG CGAATAGTTT CGGGTAG
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Protein sequence | MTTRMLALVG LVILLCMPSA WAADGVLPAV TVTTGPDGST EYSVTMQILL LMTSLSFLPA MLIMLTSFTR IIIVLSILRQ AIGLQQTPSN QVLIGMSLFM TFFIMAPVFD RIYDEGVKPY IEEQLTLQQA FEKGKEPLKG FMLGQVRTTD LKTFIEISGY KNIKSPEEAP MSVLIPAFIT SELKTAFQIG FMLFVPFLVL DLVVASILMA MGMMMLSPMI VSLPFKIMLF VLVDGWSLVL GTLANSFG
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