| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1041 |
|---|
| Symbol | |
|---|
| ID | 7087814 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 1225241 |
|---|
| End bp | 1226167 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643459952 |
|---|
| Product | protein of unknown function DUF6 transmembrane |
|---|
| Protein accession | YP_002356979 |
|---|
| Protein GI | 217972228 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0132992 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00000125365 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAAGTCTT CGAATTTAGC GTACGTGTAT GGCATGGCGG CGGTCTTCCT CTGGTCTACA
GTGGCCACGG CCTTTAAAAT TGCCTTGAGT TACTACACGC CACTGCAACT GGTGTTTGTT
GCCGTGCTCA CGTCGATTGT CGCCCTTGGC GGTATCCTGG CTTGGCAAAA AAAGCTCTGC
CTACTCAAAC AACAGTTTTT GCGCCGCCCT GCATTTTATC TAGTCACAGG GCTCATCAAT
CCCTTCCTTT ACTATGTGGT GCTGTTTAAG GCGTATTCCT TATTACCAGC GCAGCAAGCT
TTGTCACTCA ATTACACTTG GGCGGTATTG CTGCCGTTAC TGGCTGCGCC TTTGTTAAAG
CAACATTTGC GTAAGAGCGA CATTACTGCG GCTTTGATTG CCTACACTGG GGTGTTTATC
ATTGCCACCG GCGGCGATAT CAGCGGCTTT AGTTTTGATA GCCCGCTCGG GATCGGCCTT
GCCCTCACCA GCACCTTACT CTGGTGCCTA TATTGGATCG TCAACACTAA AGATCAAGGC
GATCCCGTGG TGAGTTTATT ATTGAGTTTT CTGATCGGCT TACCTTTTAT TGCCGTCACT
TTAGTACTGA CAGATACCCT ACCCGGCTTT AGTCTTAAGG CGATATTTGC AGGTATGTAT
GTGGGCTTGT TCGAGATGGG CATTACCTTC GTGCTCTGGT TAATGGCGCT GAAAACCGCC
ACTCGCACCG CGAACATCAG CACTATGGTG TTTTTATCCC CTGTGATGTC GATTGGTTTT
ATCGCGTGGA TTTTGCAGGA AACGATAGCG ATGGCGACCT ATCTCGGCCT AGCCTTTATT
TTATCAGGGA TGATGTTGCA ACAACTTTGG CCCCGTTTTA CCGAGCGCAA AAGTAAGATA
AGCCCAAAGC CAAAGCTCGC TGAATAA
|
|---|
| Protein sequence | MKSSNLAYVY GMAAVFLWST VATAFKIALS YYTPLQLVFV AVLTSIVALG GILAWQKKLC
LLKQQFLRRP AFYLVTGLIN PFLYYVVLFK AYSLLPAQQA LSLNYTWAVL LPLLAAPLLK
QHLRKSDITA ALIAYTGVFI IATGGDISGF SFDSPLGIGL ALTSTLLWCL YWIVNTKDQG
DPVVSLLLSF LIGLPFIAVT LVLTDTLPGF SLKAIFAGMY VGLFEMGITF VLWLMALKTA
TRTANISTMV FLSPVMSIGF IAWILQETIA MATYLGLAFI LSGMMLQQLW PRFTERKSKI
SPKPKLAE
|
|---|
| |