| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0912 |
|---|
| Symbol | |
|---|
| ID | 7087273 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 1067488 |
|---|
| End bp | 1068177 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643459826 |
|---|
| Product | phage shock protein A, PspA |
|---|
| Protein accession | YP_002356853 |
|---|
| Protein GI | 217972102 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0749469 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCATTC TGAATAAAAT TTTAACAGCG TTTCGTGGTG GTGCTACCGA AGTGGGTCAA
GGCATCGTTG ACGCAAACTC AACCCGTATT TTCGAACAGG AAATCCGTGA CGCAGAAAAG
CATTTAACCA ATGCTAAACG TGAACTGACC GATGTCATGG CGAAAGAAAT GCAAGCCAGC
CGTGAAATCG ACCGCCTGAA ACGTTCGATT GCCGAACACG AAGGTTATGC GACTCAAGCA
TTGGACAAAG GTAATGAAGC CTTAGCAATT GAAATTGCAG AGAAGATTGC CGAGTTAGAC
CAAGAGCTGT CTGAGCAACA AAGCGCCAAC GATAGCTTTA GCGCCCATGC TGCACGTTTG
AAAGACTTAG TGAAGAAAAC CGAGCGCCAA CTATCTGATT ATCAACGTCA GCTGAGCATG
GTTAAAACCA CTGAAAGCGT GCAAAAAGCT ACGGCTACCA TTACTGACTC GTTCGCGTCT
AGCAACTCTA AGCTGCTGAA CGCTAAAGAT TCACTCGAGC GCATCAAGGC ACGTCAGCAA
CAGTTTGACG ATCGTCTGAA AGCGGCAGAA ACCTTAGCCG ATGAAAACAG TGACAAGTCA
CTGCAATCTA AGCTAGCCGA AGCCGGTATT GGTGAGCAAA AGTCGAATGC AAATGCTGTG
CTAGACCGAA TCAAAGCACG TAAAAGCTAA
|
|---|
| Protein sequence | MGILNKILTA FRGGATEVGQ GIVDANSTRI FEQEIRDAEK HLTNAKRELT DVMAKEMQAS
REIDRLKRSI AEHEGYATQA LDKGNEALAI EIAEKIAELD QELSEQQSAN DSFSAHAARL
KDLVKKTERQ LSDYQRQLSM VKTTESVQKA TATITDSFAS SNSKLLNAKD SLERIKARQQ
QFDDRLKAAE TLADENSDKS LQSKLAEAGI GEQKSNANAV LDRIKARKS
|
|---|
| |