| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0881 |
|---|
| Symbol | |
|---|
| ID | 7087242 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 1032913 |
|---|
| End bp | 1033578 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643459795 |
|---|
| Product | anti-ECFsigma factor, ChrR |
|---|
| Protein accession | YP_002356822 |
|---|
| Protein GI | 217972071 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3806] Anti-sigma factor |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAATA TGAACTTTAG CGAACGTGTC GTTATTGATA CGCAGCAGCA ACCCTGGTTG
CCAAGTCCTG CTCAAGGCGT TTGGCGCAAA CCACTCGAAC GGGAGGCTAA AGAGTCAGGA
CACACCAGCA GCATAGTGAA ATATGACGCG GGCTCGCAGT TTGCGACCCA CCCGCATCCG
CTGGGCGAGG AAATCTTTGT GCTCGAGGGG GTATTTTCCG ATGAAAACGG CGATTACCCC
GCGGGCAGTT ATCTTCGCCA TCCGCCAGGG AGCCAACACG CGCCGTTTAG CCAAGAAGGC
TGCGTTATCT TAGTTAAACT CAATCAATTC AATCCGCGAG ATCTTGATGT GGTCAAGATT
AACACTCAGC AGACTCCTTG GTTACAAGGC ATAGGCGGCT TACAAGTGAT GCCGCTACAT
GAATTCGAGC ATGAACATAC TGCATTAGTG AAATGGCCTA AGGGTGAAAC CTTTCAACCC
CATCGGCATT TTGGCGGCGA AGAAATATTG GTGTTAACCG GCAAGTTTCA AGATGAGCAA
GGGGAATATC CGCGCCACAC TTGGATACGC AGTCCGCACA TGAGCGGTCA TTTTCCTTTT
GTCGAAGAGG AAACCATTAT CTTAGTGAAA ACAGGGCATT TACCCATTAG CACGATTCAG
CCCTAA
|
|---|
| Protein sequence | MLNMNFSERV VIDTQQQPWL PSPAQGVWRK PLEREAKESG HTSSIVKYDA GSQFATHPHP
LGEEIFVLEG VFSDENGDYP AGSYLRHPPG SQHAPFSQEG CVILVKLNQF NPRDLDVVKI
NTQQTPWLQG IGGLQVMPLH EFEHEHTALV KWPKGETFQP HRHFGGEEIL VLTGKFQDEQ
GEYPRHTWIR SPHMSGHFPF VEEETIILVK TGHLPISTIQ P
|
|---|
| |