Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_0664 |
Symbol | |
ID | 7089795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 805109 |
End bp | 806191 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643459577 |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_002356607 |
Protein GI | 217971856 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCAT ATCGACTCTT GCCACTGGCT ATGCTGCTTC CAGCCCTGCT CAGTGGTTGT TCGCCAGCGG AAAGTTCAGT ACAAGTGGAC ACTGTCCGTC CGGTTAAACT GTTTGAAGTG CTCAATGTAG AAGCTGGAGA TTTTAGAACC TTTCCAGCCC GCGTTTCCGC TAACAGCCGC GCCGAATTGT CGTTCCGTAT TTCAGGGCAA TTAACCGAAC TGACATTAGT CGAAGGCCAA AGAGTCGCTC AAGGTAGCCT GCTCGCGCAG CTTGACGACA GGGATGCCAA AAATAACTTA ATGACCCGAG AGGCCGAACA CGAACTGTTA GCCGCCGACT TTAAACGTAA GGTCGAGCTG CTTAATCGTA AACTGATTTC ACAATCTGAG TTTGATAGCA CTCAAGCGCA GCTCAAATCG GCCAAGGCCG CCCTTGCGGC AGCACGCGAT CAGCTGAGTT ACACCCGCTT AACCGCGCCC TTTAGCGGCA CGATTGCTAA ACGTTTAGTG GATAACCACC AAATAGTGCA GGCCAATCAA GGGGTGTTAA CACTGCAAAA CAACAACTTG CTCGATGTGA GCATTCAAGT GCCCGAGGCG ATGGCGGCGG GGCTGAAGCA ATATACCGAT CAAGCTCACT TTACCGCTAA GGTGCGTTTT AGCGCCTTTC CCGAGCAGAG TTTCGACGCC AAGTTTAAAG AATACTCCAC CCAAGTCACC CCAGGTACTC AAGCCTATGA AGTGGTATTT TCATTGCCTC AACCTCAAGA TATTCAATTA CTTCCGGGGA TGAGCGCCGA GCTAACCTTG GCCTTAGTTA AAGATCCAAG CGCCCTTGCA TCCAGCATAG TACCCGTGAC CGCTATCGAT AAACGCGATC AAGATGGCCA AGTGCAAGTG TGGGTTTATC AAACCCAATC GGGTGAAGTC AAACCGACTA TGGTGACCCT AGGGCGCGTG AGTAACCAAG GCGTTGAGAT TTTAACGGGT ATCAACAAGG GCGATCTTAT CGTCAGCGCT GGGGTGTCTC AATTATCCGC TGGCATGAAA GTCAAACCAC TACGCTGGCA GCGTGGGGTG TAA
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Protein sequence | MKSYRLLPLA MLLPALLSGC SPAESSVQVD TVRPVKLFEV LNVEAGDFRT FPARVSANSR AELSFRISGQ LTELTLVEGQ RVAQGSLLAQ LDDRDAKNNL MTREAEHELL AADFKRKVEL LNRKLISQSE FDSTQAQLKS AKAALAAARD QLSYTRLTAP FSGTIAKRLV DNHQIVQANQ GVLTLQNNNL LDVSIQVPEA MAAGLKQYTD QAHFTAKVRF SAFPEQSFDA KFKEYSTQVT PGTQAYEVVF SLPQPQDIQL LPGMSAELTL ALVKDPSALA SSIVPVTAID KRDQDGQVQV WVYQTQSGEV KPTMVTLGRV SNQGVEILTG INKGDLIVSA GVSQLSAGMK VKPLRWQRGV
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