| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0459 |
|---|
| Symbol | |
|---|
| ID | 7086935 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 525380 |
|---|
| End bp | 526297 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643459386 |
|---|
| Product | pseudouridine synthase |
|---|
| Protein accession | YP_002356416 |
|---|
| Protein GI | 217971665 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCAT CTGCCCGCGC CGCCCAACCT TCTTACATAG TGCTTCCTGT GAATATCACA
GATAAACCCA CAGTGTTTGC CTTTCTCGCA CAGCATTTTG CCCGCATAGG TGAAGATGTG
TGGCGTCAGC GGATCCTCGA CGGAAAAGTG CATTGGCGCG ACGGCAGTTT GATCGCCATG
GACACCGAAT ATCGTCCTGC GGCACGGGTG TATTACTACC GTGAAGTGCC GGTCGAAGCG
AAAATCCCCT TTGAAGAACA GATCCTATTC CAAGATGACA ATGTCATCTT GGCCTATAAG
CCACACTTTT TACCTGTGAC TCCAAGCGGC AATTATGTGA ACGAATGTCT GGTACATAGG
CTGAGATTAC GCACTGGCAT AGACACTATC GCGCCTGCTC ATAGGCTTGA CCGTGAAACC
GCAGGGGTGA TCTTGATGAC AGTCGCGCCA GAAACCCGCG CCCTTTATCA TCAATTATTT
ATCGACGATG CTATTCGTAA AGACTATCAA GCGATTGCCA AGCTGACACC TGATATTATT
GAACAATATC AACAGGGAAG CTTAACGTTA CCCCTGCATT GGACGGTGAG AAATCGCATG
CAGCCGAGCG ACCCGAGTTT TACCATGAAA ATCGTTGAAG GCGAGGCGAA TACCCATTCC
GAAATCAGCC TAGTGGCGAT AAAAGGCGAT CTTGGTTTGT TCCACTTGAG CCCGATTACC
GGCAAAACCC ACCAGTTGCG GGTGCATATG CAAAGCTTAG GTATGCCATT GTTAAACGAC
AGATTTTATC CAAGCTTATT ACCCAAAGGG CCAGATAAGT TTGCGACGCC TCTTAAGTTG
ATGGCACAGC GTTTACGTTT CATTGACCCT GTGAGTGGGA TCCATCACGA CGTGCAATGT
GAGGGTTTTG CGTTTTAG
|
|---|
| Protein sequence | MTASARAAQP SYIVLPVNIT DKPTVFAFLA QHFARIGEDV WRQRILDGKV HWRDGSLIAM
DTEYRPAARV YYYREVPVEA KIPFEEQILF QDDNVILAYK PHFLPVTPSG NYVNECLVHR
LRLRTGIDTI APAHRLDRET AGVILMTVAP ETRALYHQLF IDDAIRKDYQ AIAKLTPDII
EQYQQGSLTL PLHWTVRNRM QPSDPSFTMK IVEGEANTHS EISLVAIKGD LGLFHLSPIT
GKTHQLRVHM QSLGMPLLND RFYPSLLPKG PDKFATPLKL MAQRLRFIDP VSGIHHDVQC
EGFAF
|
|---|
| |