| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0329 |
|---|
| Symbol | |
|---|
| ID | 7086616 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 370609 |
|---|
| End bp | 371796 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643459251 |
|---|
| Product | benzoate transporter |
|---|
| Protein accession | YP_002356288 |
|---|
| Protein GI | 217971537 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3135] Uncharacterized protein involved in benzoate metabolism |
|---|
| TIGRFAM ID | [TIGR00843] benzoate transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000780494 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGGCGAG ATGCAGGGAG TTTGTCAAAA ATATCAGCGG GTTTTATTGC AGTATTAGTG
GGTTATAGCA GCTCGGCTGT GATTATCTTT CAAGCGGCGG AGGCCGTGGG TGCGACACCT
GCACAGATTA GTTCATGGCT GTGGGCTTTA GGTGTGGGCA TGGGCGTGAC CAGCATAGGA
TTATCGCTTT ACTACAAGAA TCCTATTCTA ACGGCTTGGT CGACACCGGG CGCGGCGCTG
ATGGTGACCA GCCTAGCGGG ATTGAGCGTC AACCAAGCCA TAGGCGCGTT TCTGGTGAGT
TCGATTTTAA TCACCCTTTG CGGGGTGGCG GGCTGGATGG ATAAACTTAT TCGTATCATG
CCGCAGTCAG TCGCTTCAGC CATGTTAGCG GGGATCCTGC TGCAATTTGG GCTAGGGCTA
TTTCAGGCTA TGCAAACCCA GCTGAGCCTC ATATTAATCA TGCTGTTGGT GTTTGTCGTG
GTTAAGCCTT TTGCGCCGCG CTACATCATC TTGCTGACCT TGCTGGTGGG CATTGGCATG
AGCTTTCAAT TGGATTTACT CAAGTTAGAT GCCGTTCAGT TGCAACTGGC GATGCCAGTG
TGGACCACGC CTGAGTTTTC GCTGGCGAGT GTAATTGGCG TGGCGCTACC GCTGTTTGTA
GTGACTATGG CCTCGCAAAA TATGCCAGGA GTTGCTGCGC TGCACGGTAA TGGCTACAGG
CCGCCTATTT CGCCTTTGAT CACGAGCACA GGGCTAATCG GGGTAATTCT GGCGCCCTTT
GGCGGTTTTG CTTTTAACTT ATCCGCCATC ACAGCGGCTA TCTGCATGGG GAAAGAGGCG
GATCCGAATC CGGCGACCCG CTACTGGGCG GCGGTATGGG GCGGGGTGTT TTACTTTATC
ACTGGGTTAC TCGGCGCCAC TGTGGTTGGT CTGTTTTCCG CTTTCCCGAA GGAATTAGTA
CTAGCCATCG CCGGATTAGC GCTGCTTGGC ACTATCGCCA ATAGCCTGAC TGCCGCATTA
GCTAAAACCG AAGATCGCGA AGTCGCGGTG ATCACTTTCT TGGTCACGGC ATCAGGTTTT
AGTGTGCTGG GTATCGGCAG CGCATTTTGG GGACTGTTGC TTGGGTTTAT TATCCATTGG
TGGAACGGGC ACAGAACTGC AGCTGTGGTG AAGCGAGCGA ATAATTAG
|
|---|
| Protein sequence | MWRDAGSLSK ISAGFIAVLV GYSSSAVIIF QAAEAVGATP AQISSWLWAL GVGMGVTSIG
LSLYYKNPIL TAWSTPGAAL MVTSLAGLSV NQAIGAFLVS SILITLCGVA GWMDKLIRIM
PQSVASAMLA GILLQFGLGL FQAMQTQLSL ILIMLLVFVV VKPFAPRYII LLTLLVGIGM
SFQLDLLKLD AVQLQLAMPV WTTPEFSLAS VIGVALPLFV VTMASQNMPG VAALHGNGYR
PPISPLITST GLIGVILAPF GGFAFNLSAI TAAICMGKEA DPNPATRYWA AVWGGVFYFI
TGLLGATVVG LFSAFPKELV LAIAGLALLG TIANSLTAAL AKTEDREVAV ITFLVTASGF
SVLGIGSAFW GLLLGFIIHW WNGHRTAAVV KRANN
|
|---|
| |