| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0239 |
|---|
| Symbol | |
|---|
| ID | 7085895 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 272805 |
|---|
| End bp | 273677 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 643459159 |
|---|
| Product | formate dehydrogenase subunit FdhD |
|---|
| Protein accession | YP_002356199 |
|---|
| Protein GI | 217971448 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1526] Uncharacterized protein required for formate dehydrogenase activity |
|---|
| TIGRFAM ID | [TIGR00129] formate dehydrogenase family accessory protein FdhD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.000144632 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGGCACAG ATAAAGAAGT AGCGGCAGCT AACCCCACTC AGAAGCCTCA TCATCAGTGT
TCTTTTGTGA GAACCCAAGC GGAAGTACCG TTAACCATTG CCGTAAAAGC AGTGAATGAA
GCTGGGGAAG TGCTGGATAA ATTTGTCGCC TGCGAACGTC CACTTACCGT TTATTTAAAC
TGGCGTCCGA TAGTGACGCT GATGACACTA GGGGCAAAAC CTGAGTCTCT GGCGTTAGGT
TATCTTAAGA ACCAAGGCTT TATTTCGGAT GTGAGCCTGC TGGACTCTGT CATCGTCGAT
TGGGATGTGA GTTCTGCGGC TGTGGTTACC CGTGAACAAA CCGCCGATCT CGACGAGAAA
CTCTCCGAAA AAACCGTGAC GTCAGGCTGT GGTCAAGGCA CGGTTTATGG CAGTTTCATG
CAGGATCTAG ATAACATCAA TTTACCTACA CCGAGTTTGA AGCAAAGCAC GCTGTATAGC
TTATTGAAAA ATATCAACGA ATATAACGAA ACCTATAAGA ATGCTGGCGC TGTGCATGGC
TGTGGTTTGT GCGAAGACGA TAAGATTATG GCCTTCGTTG AAGATGTCGG CCGCCATAAT
GCCGTCGATA CCTTGGCTGG GGATATGTGG CTGATGCAGG ATCGTGGCGA TAACAAAATA
TTCTATACCA CAGGCCGCTT AACCTCTGAA ATGGTGATTA AAGTCGCCAA GATGGGGATC
CCCATTTTGC TATCACGTAG CGGCGTGACT CAGATGGGCT TAGCACTGGC GCAGCAGTTA
GGCATTACTA TTATCGCCCG CGCTAAAGGT CGACACTTTT TGGTGTATCA CGGCAGTGAA
AATCTGCAAT TTGATGCCAA TACGGCTCCT TAG
|
|---|
| Protein sequence | MGTDKEVAAA NPTQKPHHQC SFVRTQAEVP LTIAVKAVNE AGEVLDKFVA CERPLTVYLN
WRPIVTLMTL GAKPESLALG YLKNQGFISD VSLLDSVIVD WDVSSAAVVT REQTADLDEK
LSEKTVTSGC GQGTVYGSFM QDLDNINLPT PSLKQSTLYS LLKNINEYNE TYKNAGAVHG
CGLCEDDKIM AFVEDVGRHN AVDTLAGDMW LMQDRGDNKI FYTTGRLTSE MVIKVAKMGI
PILLSRSGVT QMGLALAQQL GITIIARAKG RHFLVYHGSE NLQFDANTAP
|
|---|
| |