Gene Sbal223_0180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_0180 
Symbol 
ID7086782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp207503 
End bp208471 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content41% 
IMG OID643459100 
Producttranscriptional regulator, LysR family 
Protein accessionYP_002356140 
Protein GI217971389 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACATTA GTAACATGGA TGGCCTAGAT ATTCTGAGTT TGAAAATACT CGTTTCATTA 
TATGAGAACA AGTCTGCAAC ATACGTATCT AAGGCTCTTG ATATTCCGGC TCCTAAAATT
AGTCGTAGCC TTAAAAATCT ACGGGAAATT TTTGGTGATG AACTTTTCAT TCGTCGTAAA
TACGGACTAT TCCCCAATGA GTTTGCGACC CATTTATATC CAATCGCGAA AGAAGCCATT
GAATGTACTG ATAAGTTTCA TAAGGCCAGA GCCGCAAATG CTAACTTAGT GAAAACGCAT
ATCGAGATTG CTGCTCCCGG CTTGATTGCT TACGCTTTTC CGAAAGCGTT AATGCAGGCC
ATTAAAGATG AACAGAAGCT GATGCACATT AATATCACCC CTTGGTCTAT GCATACGACC
CAAGACATTA TTAACGGTGA TACTACGCTG GGCATTTGCT GCAATAAAAG CACGGCTGAT
GTGGCCGCCT TTGGCGATAA ACTCCTGACG ACCACTCTGC AAAGCATGGA TAAGGTTTAC
CTTCTTGCGA GCCGTAATCA TCCGATTTTC AAACGGGAAA TCACTTTAGA GACGATTGCA
GAATATCCCT ATGTGAATAC CGACCTCGGT AATCCCAGTT CTAAGCTCAG TCCTTACCAA
GAGTTTTGTC TGAAGAGCAA CATTAAACTC AATACTGAAA TTACTATTAC CAGTATTTCA
AGTTTGTTTG AATACCTAGG TGAAAGTCAG GCACTGTCGT TATTGCCCTA TCGCGTGGTT
TACGAGATGG TAAGTGATGT GGCTGAACTG CACACATGCC AACTGTCGCA ACTCGAAGCC
GAACGTTTAT ATGCTCATGC CGAAGCGCCA ACCATTTTCT TAGTGCAAAA AAATCAGCCA
AGCAAAGTGA ATGATGATTT AGTGTGGCTA AGTGGACAGA TTAAAAAGAT TGTTGACCAT
ATTATTTAG
 
Protein sequence
MHISNMDGLD ILSLKILVSL YENKSATYVS KALDIPAPKI SRSLKNLREI FGDELFIRRK 
YGLFPNEFAT HLYPIAKEAI ECTDKFHKAR AANANLVKTH IEIAAPGLIA YAFPKALMQA
IKDEQKLMHI NITPWSMHTT QDIINGDTTL GICCNKSTAD VAAFGDKLLT TTLQSMDKVY
LLASRNHPIF KREITLETIA EYPYVNTDLG NPSSKLSPYQ EFCLKSNIKL NTEITITSIS
SLFEYLGESQ ALSLLPYRVV YEMVSDVAEL HTCQLSQLEA ERLYAHAEAP TIFLVQKNQP
SKVNDDLVWL SGQIKKIVDH II