| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0129 |
|---|
| Symbol | |
|---|
| ID | 7086731 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 149754 |
|---|
| End bp | 150317 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643459053 |
|---|
| Product | Chorismate lyase |
|---|
| Protein accession | YP_002356093 |
|---|
| Protein GI | 217971342 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG3161] 4-hydroxybenzoate synthetase (chorismate lyase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 84 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGTGA CTAGCTTAAG CTTCCCCTAT GGTGAATCTA TTCAGTGGTT TTGTGCCGAA
AGCGCCAACA AACTCCCCAA ATCCCCCTTG AAAGAATGGT TACTTGCCAC TGGCAGCCTA
ACTCAAAAAC TCAAAACTTG CTGCACTCAA TTTGAAGTCA AAGTCCTTGG CGAAGGACTG
CATGCGCCCT TAGATGGCGA ATATCCCCAG CAAGGCTCAG TATGGATCCG CGAAGTGTTA
CTTTGCCTCG ACTCAATCCC TTGGGTGTTT GCCAGAACCT TGATCCCCGA AAAGTTAATG
GCCGAGCGCC AAGCGGATTT CCTTGGTCTG GGCACCCGCC CCTTAGGTGA ACTGCTGTTT
AGCCAAGATC ATTTTATCCC TGGCAGAATT GAAGTCGCCA GTTTTGAGAC CTGTAGTCGC
CTCGCGCATT TAGCCGAAAG TTTAGATCAG AGTGTCGAAC ATGAACTCTG GGGACGCCGC
CGCTATTTTC ATCACGGTGA ACACGAAATG ATCGTCAGTG AAATCTTTCT GCCTGCGGCC
GAGCAAGCTA TCCGTCAGTT ATGA
|
|---|
| Protein sequence | MNVTSLSFPY GESIQWFCAE SANKLPKSPL KEWLLATGSL TQKLKTCCTQ FEVKVLGEGL
HAPLDGEYPQ QGSVWIREVL LCLDSIPWVF ARTLIPEKLM AERQADFLGL GTRPLGELLF
SQDHFIPGRI EVASFETCSR LAHLAESLDQ SVEHELWGRR RYFHHGEHEM IVSEIFLPAA
EQAIRQL
|
|---|
| |