Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_0108 |
Symbol | |
ID | 7087373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 127137 |
End bp | 128567 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643459032 |
Product | selenocysteine synthase |
Protein accession | YP_002356072 |
Protein GI | 217971321 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1921] Selenocysteine synthase [seryl-tRNASer selenium transferase] |
TIGRFAM ID | [TIGR00474] seryl-tRNA(sec) selenium transferase |
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Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 79 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACAGA TGATGACCCA AGCACCCGAA ACGCCACAAG CCTTGTACCG CGCTTTGCCC TCAATGGACA GCTTACTGGC GGAGCCTAGC TTTGTTGTAT TGCAGCAGTC TTACGGCAAA GTGGCAGTAA AGGCGGCGCT GGATAGCCAG TTAAAGGCGG CGCGTAGCTT AATCGGCAGT GAGCGCCGGT TGCCGACATG GTGTGGCGAG CTTGCGCAAT TGCACGGATG TTTGGTTGAT CAACTGTCTA AAGATTACAG CCACAGCTTA ATACCTGTGT GGAATCTTAC TGGCACCATA CTGCATACCA ACCTCGGCCG AGCGCAGCAG TCAGAAGCGG CGATTCGAGC CGTGACTTCT GTTATGCGCT ACCCCACACC GCTGGAGTTT GAGCTTGCGG CAGGTGAACG TGGTCACAGG GATAATGCGA TCAGTGCTTT AATCCAGCGC TTAACGGGTG CCGAGGCTTG TTGTGTCGTG AATAACAATG CTGCTGCTGT GTTGTTGATG CTGTCAGCTG TGGCTGCGGG GAAAGAAGTC ATAGTCTCCC GTGGTGAGTT GGTGGAAATT GGCGGCGCGT TTCGCATCCC TGACATTATG CGCCAAGCAG GCTGCACCTT AGTTGAGGTC GGCAGTACCA ATCGGACACA TTTTAAGGAT TATGAGCAGG CGATTACTGA AAATACCGCT GCAATAATGA AGGTCCACAC CAGTAATTAT CATATCAGTG GCTTCACTGC CGCAGTGGAG GAGGCAAGAC TGGGTCAGCT ATGTTGTGAG CATGGCATAT CACTCATTTC GGATCTTGGT AGTGGTTCAC TGACGGACCT GCGCCGCTTT GGGCTAAAAC AAGAACCTAC GCCTCAAGCC ATGCTGGCCG ATGGTGTCGA TTTAGTGAGT TTTTCCGGCG ACAAACTATT GGGTGGCCCT CAGTCTGGTT TGATCGTTGG TAAACAGTCG CTGATTAAGC AGTTACAGAG TCATCCACTA AAGCGCGCCC TACGTTGCGA TAAGCTGATT TTGGCGGCGT TAGAGGCAAC ATTGATCCAC TATCTTAACC CTGAAACCTT AGACTCTGAG CTGCCCATTA TGGCGAAATT TGCCCGTAGC CAAGAGACGT TATGGCAGAT TGGTCGTCGC TTACAGCATG CTTTGGCAGC GCACTTTGAA CCTTGTTATC GCATTGAATT AGTTGAGTGC CAAACACAGG TCGGCAGTGG CTCGCAGCCC GACACTTTTT TACCCTCAGT GGCGCTGTGT TTTACCGCAC TCGATGGCGG TAGTTTAAGT TTGTTAGAAC AAAAATTTAA GCAGGCGGCA CGGCCTATCA TAGGTCGCAT GAGTAACGAT CAACTCAGAT TAGATTTACG CGGTCTTGAT AGTGAAGCCG AGCTACTCGC CGAGCTGAGC ACCTTAGGTA TGCAGTTGTG A
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Protein sequence | MTQMMTQAPE TPQALYRALP SMDSLLAEPS FVVLQQSYGK VAVKAALDSQ LKAARSLIGS ERRLPTWCGE LAQLHGCLVD QLSKDYSHSL IPVWNLTGTI LHTNLGRAQQ SEAAIRAVTS VMRYPTPLEF ELAAGERGHR DNAISALIQR LTGAEACCVV NNNAAAVLLM LSAVAAGKEV IVSRGELVEI GGAFRIPDIM RQAGCTLVEV GSTNRTHFKD YEQAITENTA AIMKVHTSNY HISGFTAAVE EARLGQLCCE HGISLISDLG SGSLTDLRRF GLKQEPTPQA MLADGVDLVS FSGDKLLGGP QSGLIVGKQS LIKQLQSHPL KRALRCDKLI LAALEATLIH YLNPETLDSE LPIMAKFARS QETLWQIGRR LQHALAAHFE PCYRIELVEC QTQVGSGSQP DTFLPSVALC FTALDGGSLS LLEQKFKQAA RPIIGRMSND QLRLDLRGLD SEAELLAELS TLGMQL
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