Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_4530 |
Symbol | |
ID | 5756365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009998 |
Strand | - |
Start bp | 6273 |
End bp | 8090 |
Gene Length | 1818 bp |
Protein Length | 605 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641290889 |
Product | conjugal transfer mating pair stabilization protein TraN |
Protein accession | YP_001556947 |
Protein GI | 160872940 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02750] type-F conjugative transfer system mating-pair stabilization protein TraN |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTCAGT TGAATAATGC CTTAATCCTA AGTGCCATCC TCACATTGAG CGCCGCCTTG CCAGTTGTTG CGACAAACAG CGAAAAAGAC TATCGCAACA ATGTGCAGTG GGCCAAAGAC AGTATCAAGC AGAATCAGAA CAAAGCGGGT TACACCGATT TTGACGTTAA CAGCTTATGC AAAGATGCGA CATGTCAGCA AGAAGTCGCC AATCCGAGCG AAAGCCGTTA CTACAACAAC CCAAGCGCCA TGGACAGTGC CAAAATGCAA GGCATGAGCA CGGATGGTCA AGCCCAAGCC GTGACGAGCG GCTTTAACAA GGGACGCCCG ACTATCGATG AAAACGATCC GGCATACCAT ACCGCCGTTG GCTATCAAAA TGATGCTTAC AATATCAGCC ACGGCATTTC ATCTAAATAT CATGACTGTG AAAAAGGGCT CGTTTGTGAA GTCGATTCTC AGCCACGTTC TTGCACGTTG CCCACCAATA ATCCGGTGCA ATGCTACCTA ACACCCTTTG TCAAAAGCAC GTCAACGCGT GAAAAAGAGC ACTCATTCCG GTTGTCAGGT AAGCCGCCAT TTACCATTAC ACTGCCTAAT CCCAACGCTG AAATTAAACG GATACGATTC AACGGCGATT ACTCAAGTTG GGGTGGCGCG ACAAAACTTG AAATCAAACT TAATGACATC TATATCGGCC ACATTCCTTC ACAACGCGCC GCTGGTGACT GCATTGTAAA TGGCTTTTGT CCCTCAAGTG TCAACGCCAC CTTAAGCACT GATAACTATC AAGGCGGTAC ATCACCACTT ACAGTCAATA TTGGCACTAT TCTGGGTGGT ACATGGGATT GGGCTTTTTA CCTCCCAATC GAAAATCTAC CGATCACATT CGTGACAACA GAAAGCGACG TTGAAATTGG CTACAACAAC AGTTGCGGCG CAGTCCTCCC CGAGTGCCAA CAAGTCCAAT CTCAATGTAT TGAAGGTAAA GAAACACGCA TGATTAATGG GATCAGCGTG ACATTGGATT GCTGGAAAGA ACAAACCACC TATCAATGTG CCTTTCCCAA TACCTGCACC ACCCTCGCAG ATTGCAGCAT TCAATCAACC AGCTGTGACA CCCAACTTGG CGGCGTTTGC ATTAAAGATA AACAACAACG CCTATGTGAT AAACAGCAAT GCCGCGATAC GGGCCTTATC TGCGGTGCAG ACAGCTTTGC GCTCAGTGGT GACTATTACG ATCCTGCGGC CACTCGCAGC ACTGACTTTA ACCATGCTGC GGCAGGACTG GCCGCCGTCA GTGACGCAGC CGGTGATGTG AAAGACAAAG CCAACATCAA CGAAAACAGC GCCATCATTT TCAAAGGCAA CATCATGGAA TGCAGCGATA AAGCGCTGGG GATAAGCAAT TGTTGTCAGG ACAGCGGTTG GGGTAACGGC ATCGGCTTAA CGTCCTGCAG TGAAGAAGAA AAAGCGCTGG GTACCGCCAA AGAAGACAAG CTCACCGTAT CACTTGGCCA ATATTGCGCT GAGAAAGTAC TTGGCGTGTG TATCCGCAAG AAAAAAGCCT ATTGCGCGTT TGATAGCAAA CTCGCGCGCA TTGTGCAGGT TGAAGGCCGC GCGCAATTGG GTAAAAACTT TGGCAGCGCC AAGCATCCTG ATTGCAGCGC CTTTTCCCCC AACGAACTGC AACGCATTGA TATGTCGTCA ATGGACTTTT CTGATTTTTA TGAAGACATG TACGACGCCA TCGAACTGCC CAGCACTGAC GAAATTCAAA AACGCTTACA ACAGTCGGTT GGAGGAACCA AACCATGA
|
Protein sequence | MTQLNNALIL SAILTLSAAL PVVATNSEKD YRNNVQWAKD SIKQNQNKAG YTDFDVNSLC KDATCQQEVA NPSESRYYNN PSAMDSAKMQ GMSTDGQAQA VTSGFNKGRP TIDENDPAYH TAVGYQNDAY NISHGISSKY HDCEKGLVCE VDSQPRSCTL PTNNPVQCYL TPFVKSTSTR EKEHSFRLSG KPPFTITLPN PNAEIKRIRF NGDYSSWGGA TKLEIKLNDI YIGHIPSQRA AGDCIVNGFC PSSVNATLST DNYQGGTSPL TVNIGTILGG TWDWAFYLPI ENLPITFVTT ESDVEIGYNN SCGAVLPECQ QVQSQCIEGK ETRMINGISV TLDCWKEQTT YQCAFPNTCT TLADCSIQST SCDTQLGGVC IKDKQQRLCD KQQCRDTGLI CGADSFALSG DYYDPAATRS TDFNHAAAGL AAVSDAAGDV KDKANINENS AIIFKGNIME CSDKALGISN CCQDSGWGNG IGLTSCSEEE KALGTAKEDK LTVSLGQYCA EKVLGVCIRK KKAYCAFDSK LARIVQVEGR AQLGKNFGSA KHPDCSAFSP NELQRIDMSS MDFSDFYEDM YDAIELPSTD EIQKRLQQSV GGTKP
|
| |