Gene Sbal195_4530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_4530 
Symbol 
ID5756365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009998 
Strand
Start bp6273 
End bp8090 
Gene Length1818 bp 
Protein Length605 aa 
Translation table11 
GC content48% 
IMG OID641290889 
Productconjugal transfer mating pair stabilization protein TraN 
Protein accessionYP_001556947 
Protein GI160872940 
COG category 
COG ID 
TIGRFAM ID[TIGR02750] type-F conjugative transfer system mating-pair stabilization protein TraN 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAGT TGAATAATGC CTTAATCCTA AGTGCCATCC TCACATTGAG CGCCGCCTTG 
CCAGTTGTTG CGACAAACAG CGAAAAAGAC TATCGCAACA ATGTGCAGTG GGCCAAAGAC
AGTATCAAGC AGAATCAGAA CAAAGCGGGT TACACCGATT TTGACGTTAA CAGCTTATGC
AAAGATGCGA CATGTCAGCA AGAAGTCGCC AATCCGAGCG AAAGCCGTTA CTACAACAAC
CCAAGCGCCA TGGACAGTGC CAAAATGCAA GGCATGAGCA CGGATGGTCA AGCCCAAGCC
GTGACGAGCG GCTTTAACAA GGGACGCCCG ACTATCGATG AAAACGATCC GGCATACCAT
ACCGCCGTTG GCTATCAAAA TGATGCTTAC AATATCAGCC ACGGCATTTC ATCTAAATAT
CATGACTGTG AAAAAGGGCT CGTTTGTGAA GTCGATTCTC AGCCACGTTC TTGCACGTTG
CCCACCAATA ATCCGGTGCA ATGCTACCTA ACACCCTTTG TCAAAAGCAC GTCAACGCGT
GAAAAAGAGC ACTCATTCCG GTTGTCAGGT AAGCCGCCAT TTACCATTAC ACTGCCTAAT
CCCAACGCTG AAATTAAACG GATACGATTC AACGGCGATT ACTCAAGTTG GGGTGGCGCG
ACAAAACTTG AAATCAAACT TAATGACATC TATATCGGCC ACATTCCTTC ACAACGCGCC
GCTGGTGACT GCATTGTAAA TGGCTTTTGT CCCTCAAGTG TCAACGCCAC CTTAAGCACT
GATAACTATC AAGGCGGTAC ATCACCACTT ACAGTCAATA TTGGCACTAT TCTGGGTGGT
ACATGGGATT GGGCTTTTTA CCTCCCAATC GAAAATCTAC CGATCACATT CGTGACAACA
GAAAGCGACG TTGAAATTGG CTACAACAAC AGTTGCGGCG CAGTCCTCCC CGAGTGCCAA
CAAGTCCAAT CTCAATGTAT TGAAGGTAAA GAAACACGCA TGATTAATGG GATCAGCGTG
ACATTGGATT GCTGGAAAGA ACAAACCACC TATCAATGTG CCTTTCCCAA TACCTGCACC
ACCCTCGCAG ATTGCAGCAT TCAATCAACC AGCTGTGACA CCCAACTTGG CGGCGTTTGC
ATTAAAGATA AACAACAACG CCTATGTGAT AAACAGCAAT GCCGCGATAC GGGCCTTATC
TGCGGTGCAG ACAGCTTTGC GCTCAGTGGT GACTATTACG ATCCTGCGGC CACTCGCAGC
ACTGACTTTA ACCATGCTGC GGCAGGACTG GCCGCCGTCA GTGACGCAGC CGGTGATGTG
AAAGACAAAG CCAACATCAA CGAAAACAGC GCCATCATTT TCAAAGGCAA CATCATGGAA
TGCAGCGATA AAGCGCTGGG GATAAGCAAT TGTTGTCAGG ACAGCGGTTG GGGTAACGGC
ATCGGCTTAA CGTCCTGCAG TGAAGAAGAA AAAGCGCTGG GTACCGCCAA AGAAGACAAG
CTCACCGTAT CACTTGGCCA ATATTGCGCT GAGAAAGTAC TTGGCGTGTG TATCCGCAAG
AAAAAAGCCT ATTGCGCGTT TGATAGCAAA CTCGCGCGCA TTGTGCAGGT TGAAGGCCGC
GCGCAATTGG GTAAAAACTT TGGCAGCGCC AAGCATCCTG ATTGCAGCGC CTTTTCCCCC
AACGAACTGC AACGCATTGA TATGTCGTCA ATGGACTTTT CTGATTTTTA TGAAGACATG
TACGACGCCA TCGAACTGCC CAGCACTGAC GAAATTCAAA AACGCTTACA ACAGTCGGTT
GGAGGAACCA AACCATGA
 
Protein sequence
MTQLNNALIL SAILTLSAAL PVVATNSEKD YRNNVQWAKD SIKQNQNKAG YTDFDVNSLC 
KDATCQQEVA NPSESRYYNN PSAMDSAKMQ GMSTDGQAQA VTSGFNKGRP TIDENDPAYH
TAVGYQNDAY NISHGISSKY HDCEKGLVCE VDSQPRSCTL PTNNPVQCYL TPFVKSTSTR
EKEHSFRLSG KPPFTITLPN PNAEIKRIRF NGDYSSWGGA TKLEIKLNDI YIGHIPSQRA
AGDCIVNGFC PSSVNATLST DNYQGGTSPL TVNIGTILGG TWDWAFYLPI ENLPITFVTT
ESDVEIGYNN SCGAVLPECQ QVQSQCIEGK ETRMINGISV TLDCWKEQTT YQCAFPNTCT
TLADCSIQST SCDTQLGGVC IKDKQQRLCD KQQCRDTGLI CGADSFALSG DYYDPAATRS
TDFNHAAAGL AAVSDAAGDV KDKANINENS AIIFKGNIME CSDKALGISN CCQDSGWGNG
IGLTSCSEEE KALGTAKEDK LTVSLGQYCA EKVLGVCIRK KKAYCAFDSK LARIVQVEGR
AQLGKNFGSA KHPDCSAFSP NELQRIDMSS MDFSDFYEDM YDAIELPSTD EIQKRLQQSV
GGTKP