| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_4421 |
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| Symbol | |
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| ID | 5756252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 5223177 |
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| End bp | 5224040 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641290776 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001556838 |
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| Protein GI | 160877522 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAAAAA TCTTTCGTAT CAGCCTCACC CTCATTGTGG TCGCGGTTGC AGGTATCGCG
GGACATTGGA TATGGTCACA CTACCTTTAT TCTCCTTGGA CTCGCGACGG CCGAGTTCGC
GCCGAAATCA TTACCATAGC GCCAGATGTG TACGGTTGGG TGAATCAACT GAATGTAAAA
GACAATCAAA TCGTCAATAA GGGTGATGTG TTGTTCACTG TGGACGATAC CCGCTACAAG
GCCACCATTG CCGAATTGAA TGCCAAAGCG GAAAGCCAAA AATTAGCATG GGAACTGGCA
AAACATAAGT ACAAACGTCG TATCGGTTTG ACCAATGACA ACTTAGTTAG CAAAGAAACC
TTCGACGAAG CTTTTATCAA TACTGAACTG GCACGAACCA GTTATGAGCT CGCACAGGCG
CAATTAAATA CCGCCAAAAT TGACTTAGCG CGAACGCAAA TTCACGCTCC CGAAAACGGT
ACTCTGATCA ATTTAAGTCT GCGCAATGGC AACTATGTCA GCAAAGGCAA CTCAGTATTT
TCGCTGGTCA AACAAGATTC TCTCTATATC ACAGGCTATT TTGAAGAAAC CAAAATCCCC
TTGGTTCACA TAGGTCAAAA CGCCGATGTT AGCCTGATGA GTGGCGGCCA GGTCTTGCAT
GGCAAAGTGA CCAGCATAGG TAAAGCAATC GCCAATACCA ATGTCACTAC TAATGGACAG
TTATTGCCGC AAATCGGCCA AACCTTCAAT TGGGTGAGGT TGTCGCAGCG TATTCCGGTC
GATATTGAGC TAGATAGCAT TCCTAAGGAC ATAGAGCTGA GCGTCGGCAT GACAGTTTCC
ATCCAGCTAC AGACTGACAA ATAG
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| Protein sequence | MGKIFRISLT LIVVAVAGIA GHWIWSHYLY SPWTRDGRVR AEIITIAPDV YGWVNQLNVK
DNQIVNKGDV LFTVDDTRYK ATIAELNAKA ESQKLAWELA KHKYKRRIGL TNDNLVSKET
FDEAFINTEL ARTSYELAQA QLNTAKIDLA RTQIHAPENG TLINLSLRNG NYVSKGNSVF
SLVKQDSLYI TGYFEETKIP LVHIGQNADV SLMSGGQVLH GKVTSIGKAI ANTNVTTNGQ
LLPQIGQTFN WVRLSQRIPV DIELDSIPKD IELSVGMTVS IQLQTDK
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