| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_4237 |
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| Symbol | |
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| ID | 5756068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 5014115 |
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| End bp | 5015506 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641290593 |
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| Product | Sel1 domain-containing protein |
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| Protein accession | YP_001556655 |
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| Protein GI | 160877339 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000679734 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAGATAT TCACGATTGC GACTCTCCTA TTACTGCTGA CCCTAAGCTT TGCAGCAACA
GCGGAAAAAT CCGCGCTGGA ACAGTTATTT GAGCAACAAC AATACAATGC TTTCTTACAA
CAAGCGCAGC AGCAAGCCGC AGAAAACAAT GCTGATGCGT TATTTCTCCT GGGTAAAGCC
TACCATCTCG GCCGTGGCGT CACGCAAGAC AATGCCACCG CCAGCCAATA CTATGAACAA
GCCAGAGCCT TAGGTTCGGC CCGTGCCAGC CATAATCTAG GCAGTATGGC GCTGGATAAT
GATCGAAAAA CGCAGGCCAT CCCCTTTTTA GAAGAAGCAC TGGCGCGGGG TCTTAAGCTA
CCGACCTTAT ATAACCTAGG ACGAGCACAC AGTCCGGCAG ATCCCAGCTC AAGGTTCTAT
CTAACGAAAG CAATCGCAGC GGCGCAGCGA GCGGGGAGTT ACTTTGGACA AGCCTTTGAA
CTTCAACCCG ATAACCTCTA TCTGGATAAT GCCTCACGCG AGTATCTGCG CGCTTACTTA
ATAGCGATGC AAAGTGTCGG CAGCGAAAGA GAAAGTCTCG ACCTCCCGCA GTTACGCCAG
CAAGCCATAA AGTGGCTGGA ATTGGGTATG GCAGCAGATG ATGGTACGGC GTGGACAAAC
TACGGCGCCC TACTGTTGAA TGAAAATGAC TACAGCGGCG CAAAAGCCGC ATTTTTACAA
GGTGCTAAAC GTCAAGTTGC CATCGCTAAC TATCATTTAG GCAGCATGGA AGAGCGTGGT
TTGGGCGCAG AGGCCAATAA AGTGCAAGCA CTGGTATACT ACGAGAAAGC AGCGTTAGCG
GGAATGGAAG AAGCGAAGGC TCCCGCTTAT GAACTGCTTA AGGCACAACT GGAATATGAA
GACGAACTCA CTAAATTGGA ACAAGGCATT GCCCGCTTTA ATGCACTAAA ACAGCAAGAA
CAGTATGTTC CCATCTCACT GGACTCTGTT ATAAATCGGC TGGCGTGGGG CACGTTTCTG
GCACAGCAGC GGCAACTGAC TCTTTCGCTA CCCACAGCGG CCAAAATCCA ATTAAGCTTG
CAAGCCTGTG GTTTAGGCTA CAACCAATTG CATGGCAGCA CATACAATAT TGGAGAAAAC
TCGCACTGGC GTATGGCGGC GTATCTGACC TTAGCCGACA AAATCGCTTT ACCACTTGAA
GGCAGAGTCG ACGAGCATGG CTGTGCCAGC TTAACGATTG CCATGACAGA TCAGCTGTAT
CGCTTATTAC AACAAGGTGC CGTATTCGGA TTGCGCTTTC CTAACTACAC ACTGCCACTG
GCATTAAGCC AGCAAGAAAA TATCTTGCAG CTGACACTTA TGCCCGTCGA GACCCCATTA
CCGGTTGATT AG
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| Protein sequence | MKIFTIATLL LLLTLSFAAT AEKSALEQLF EQQQYNAFLQ QAQQQAAENN ADALFLLGKA
YHLGRGVTQD NATASQYYEQ ARALGSARAS HNLGSMALDN DRKTQAIPFL EEALARGLKL
PTLYNLGRAH SPADPSSRFY LTKAIAAAQR AGSYFGQAFE LQPDNLYLDN ASREYLRAYL
IAMQSVGSER ESLDLPQLRQ QAIKWLELGM AADDGTAWTN YGALLLNEND YSGAKAAFLQ
GAKRQVAIAN YHLGSMEERG LGAEANKVQA LVYYEKAALA GMEEAKAPAY ELLKAQLEYE
DELTKLEQGI ARFNALKQQE QYVPISLDSV INRLAWGTFL AQQRQLTLSL PTAAKIQLSL
QACGLGYNQL HGSTYNIGEN SHWRMAAYLT LADKIALPLE GRVDEHGCAS LTIAMTDQLY
RLLQQGAVFG LRFPNYTLPL ALSQQENILQ LTLMPVETPL PVD
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