| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_4218 |
|---|
| Symbol | |
|---|
| ID | 5756049 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 4992531 |
|---|
| End bp | 4993421 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641290574 |
|---|
| Product | formate dehydrogenase subunit FdhD |
|---|
| Protein accession | YP_001556636 |
|---|
| Protein GI | 160877320 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1526] Uncharacterized protein required for formate dehydrogenase activity |
|---|
| TIGRFAM ID | [TIGR00129] formate dehydrogenase family accessory protein FdhD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.072328 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.431807 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTTCGG AAAACAGCAT GGGCACAGAT AAAGAAGTAG CGGCAGCTAA CCCCACTCAA
AAGCCTCATC ATCAGTGTTC TTTTGTGAGA ACCCAAGCGG AAGTACCGTT AACCATTGCC
GTAAAAGCAG TGAATGAAGC TGGGGAAGTG CTGGATAAAT TTGTCGCCTG CGAACGTCCA
CTTACCGTTT ATTTAAACTG GCGTCCGATA GTGACGCTGA TGACACTAGG GGCAAAACCT
GAGTCTCTGG CGTTAGGTTA TCTTAAGAAC CAAGGCTTTA TTTCGGATGT GAGCCTGTTG
GACTCTGTTA TCGTCGATTG GGATGTGAGT TCTGCGGCTG TGGTTACCCG CGAACAAACC
GCCGATCTCG ACGAGAAACT CTCCGAAAAA ACCGTGACGT CAGGCTGCGG TCAAGGCACG
GTTTATGGCA GTTTCATGCA GGATTTAGAT AACATCAATT TACCCACTCC GAGTTTGAAG
CAAAGCACGC TGTATAGCTT ATTGAAAAAT ATCAACGAAT ATAACGAAAC CTATAAGAAT
GCTGGCGCTG TGCATGGTTG TGGTTTGTGC GAAGACGATA GGATTATGGC CTTCGTTGAA
GATGTCGGCC GCCATAACGC CGTTGATACC TTGGCAGGGG ATATGTGGCT GACGCAGGAT
CGTGGCGATA ACAAGATATT CTATACCACA GGCCGCTTAA CCTCTGAAAT GGTGATTAAA
GTCGCCAAGA TGGGGATCCC CATTTTGCTA TCACGTAGCG GCGTGACTCA GATGGGCTTA
GCACTGGCGC AACAGTTAGG CATTACTATT ATCGCCCGCG CTAAAGGTCG ACACTTTTTG
GTGTATCACG GCAGTGAAAA TCTGCAATTT GATGCCAATA CGGCTACTTA G
|
|---|
| Protein sequence | MISENSMGTD KEVAAANPTQ KPHHQCSFVR TQAEVPLTIA VKAVNEAGEV LDKFVACERP
LTVYLNWRPI VTLMTLGAKP ESLALGYLKN QGFISDVSLL DSVIVDWDVS SAAVVTREQT
ADLDEKLSEK TVTSGCGQGT VYGSFMQDLD NINLPTPSLK QSTLYSLLKN INEYNETYKN
AGAVHGCGLC EDDRIMAFVE DVGRHNAVDT LAGDMWLTQD RGDNKIFYTT GRLTSEMVIK
VAKMGIPILL SRSGVTQMGL ALAQQLGITI IARAKGRHFL VYHGSENLQF DANTAT
|
|---|
| |