| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_4180 |
|---|
| Symbol | |
|---|
| ID | 5756007 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 4947405 |
|---|
| End bp | 4949051 |
|---|
| Gene Length | 1647 bp |
|---|
| Protein Length | 548 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641290533 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001556599 |
|---|
| Protein GI | 160877283 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAAAT TCATTCAGTA TGCATGCATC CTACCTTGTT GTGTTGGCAG CCTAATCAGT
GCTGCCCAAG CAGAAGACGC TAAGCTCGCC GATCCGGCAA CAAAGGCTCA AGAAACTAAA
AAAGTCAGCA AGATCGTCGT AGTTAACAAT CCTATTTTTG ATGAATCCGA TCCCGATGCT
TTTTTCATCC ACCGCTGGGC GAACGCTTTA CACATCAGCA CCAAAGAATA TGTGGTGCTC
GATAAACTGA CCTTCGGCGA AAATGATACT GTCGCCCAGA AAGACCTCGA CGAATCGCAA
CGGCTATTAC GAGCTGTGCC CTATATCCGC GACGCCAAAA TTTATGTCGC CGAAAAAGAT
CCCCTCGCCG ATACCGATCC CACAGTTGAG TCCGTTGTCG TCGAAACCTG GGATAACTGG
TCATTATTGC CCACTGCGAG CCTGAGTAGT TCAGGTGGCG ACACTCGTTA TTCTTTTGGT
GTTAAAGAAG ACAACTTACT CGGAACAGGT ATCCGCACTC GACTCAAGTA CCAGTCCAAC
GAATCCCGTA ATGGCTACAA ATTTGCGTTC GAAGCTCCGC TGAGCATTAT CGAACACGGC
ACGGTTGCCG CCGAGTTTTA CGACAATAGC GACGGCGAAG CTAAGCACGT TTATGTCAGT
AAGCCTTTCT ATTCTCTCGA TACCAATACC ATGTATTCGG CGGAGTTTTT AGACGATAAC
CGGATTGATA CCCTGAGGCA AAATGGGCAA GAGATAAATG AATTCGAACA TACAGTCGAC
TATCTTAATC TGCAATATGG CTGGTTAATT AATAAGAACA GTGAGCATCT TTCTCGCTTT
ATTACCGGTG TTACCCAAGA CAAACATGAG TTTGCTAATT CAGATCTCTA CCCCAATTCG
ATGCTGCCTC AAGACAGGGA CTTTATGTAC CCTTGGGTCG CATACGAGTT TATCCAAGAT
GATTTCCACG TACTGAATAA CGTTCACCTG ATATCTAACA ACGAAGACTT TAACTTAGGC
TGGCATCACT ATGTGCAACT CGGCATAGAA ACCAACGACA TAGGAGATAA CAATCCTGTC
GGCTACCACG TCAATTGGCA AAGTACTGGC GGCTATAAGT TCGACGACCA ACTGTGGCTG
TTAGAAATGG GCGGCACTAG CACAATAGGC ACAACCCAAA AAGATACTTA CAAGGTCGAT
ATCCAAGCCG AATACTTCTA TCAAATCAAT CCTAAGTGGA CAGCCTACGG CAAAGCATGG
GCCAGCCTTT CAAAGAACAC TTATCTGGAT CTGAGCAAAG GGCTGGGAGA TGAAACTGGC
GTACGCGGCT ATCCCAACGA ATACCAACAA GGGGACAATC AGTGGTTACT GACCGCCGAG
ATACGCAACT ACCCCAATAT CAACTTATAC CAACTGGCTG AATTAGGTTG GGCAGTGTTT
GCCGATCTGG GCCAAGCCTC CGGCGGCCAA CTCGCCGAGA ATAACGAAGT CAGTGGTCCA
CTGGGCAGCA TAGGCATAGG CGCGCGAATT TATTCTTCTC GCTCCAGCTA TGGCAACGTC
GCCCATATCG ATTTTTCACT CCCTTATACG GGCGGCGAGT CAGTAAACAG CTGGGAATGG
CGATTCCTAG TGAAAAGCAG TTTTTAA
|
|---|
| Protein sequence | MQKFIQYACI LPCCVGSLIS AAQAEDAKLA DPATKAQETK KVSKIVVVNN PIFDESDPDA
FFIHRWANAL HISTKEYVVL DKLTFGENDT VAQKDLDESQ RLLRAVPYIR DAKIYVAEKD
PLADTDPTVE SVVVETWDNW SLLPTASLSS SGGDTRYSFG VKEDNLLGTG IRTRLKYQSN
ESRNGYKFAF EAPLSIIEHG TVAAEFYDNS DGEAKHVYVS KPFYSLDTNT MYSAEFLDDN
RIDTLRQNGQ EINEFEHTVD YLNLQYGWLI NKNSEHLSRF ITGVTQDKHE FANSDLYPNS
MLPQDRDFMY PWVAYEFIQD DFHVLNNVHL ISNNEDFNLG WHHYVQLGIE TNDIGDNNPV
GYHVNWQSTG GYKFDDQLWL LEMGGTSTIG TTQKDTYKVD IQAEYFYQIN PKWTAYGKAW
ASLSKNTYLD LSKGLGDETG VRGYPNEYQQ GDNQWLLTAE IRNYPNINLY QLAELGWAVF
ADLGQASGGQ LAENNEVSGP LGSIGIGARI YSSRSSYGNV AHIDFSLPYT GGESVNSWEW
RFLVKSSF
|
|---|
| |