| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_4101 |
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| Symbol | |
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| ID | 5755924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 4855613 |
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| End bp | 4857031 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641290451 |
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| Product | TolC family type I secretion outer membrane protein |
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| Protein accession | YP_001556521 |
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| Protein GI | 160877205 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACTT CAGCAAGACG ACAATTTCAA TGTTCAAAGA TAGCCATAGT GCTGTCATTG
ATCCTGTTAC CTTTATCGGC TCAAAGCCAG ACGTTAGAAC AAGCCGTTGC ACATACGCTT
GATACGAACC CTGATTTACG GGTTGCCTTT AACCGCTTTA AAGCGCGTGA AGAGCAAGTT
AATCAAGCAA TCGCAGGCTA TATGCCGACG ATTGATGTCA CTGGTGGCTA CGGTTACGAA
CAGACAGACA GTGTGTCGAC CCGTAGACGA CCTAACGTCG GTGAAGTTGA TAGCAAAGGG
GTGGCAGAAT TAAACCGCGG AGAGTTTGGT GTTAGCTTAA AACAAATGCT TTTCGATGGT
TTCTATACCA GCAGCGAAGT TGATCGTTAT AGCTTTGAAG CCAGCGCAGA CCAATGGGCG
CTACTTGCAG CGGCTGAAGA TATGGCACTC GATGTCAGTA AGGTCTACCT CAACTATTTA
CGCACTGATG AAGTGCTAAA ATTAGCGGAG AAAAACCTTA ACAGCCATAA AGAAATTTAT
GACCAAATCA AGCAACGTAC TGATTCAGGT TTAGGCTCAA TTGCAGATCT CTCCCAAATC
ACGGGACGCT TAGCGCGGGC CAATGCCAAC GTGATTTCTG CTCGTAACAA TTTACTTGAT
GCAAAAGCGC AGTACATTAG AATTGTAGAG TCGGCACCAG CAGACTTAAT CTTACCAGTG
CCCGATGCAG ATATGCTGCC AAAGGATCTA AGCTCAGGCA TTATCGAAGC GCAGGAGAAT
CACCCCATAC TCAAATCTGC AGCGAATGAT ATCCGTGCAG CAGAGAATGA ACGCTCTTCA
GTACAATCTA ATTACTATCC TCAGGTTTCT TTGGAGCTGA ATGGTAATTG GAATAATGAT
GTCGGCGGCG AAGATGGTAT CTCTGGCGCA GGAGCCTTCC GCAGTGATGT GGGTGGCTAT
AGCAATGATT TAATGGCCAT GGTTCGAGTA AAATATAACT TATTCTCGGG CGGTAAAGAT
CTTGCCCGTG AGAAAGAAAC GGCCTACAAA CTTGGTGAAG CCAAAGAAAT CCGTCAACGT
GCCCAGCGCG AAGTCGTTGA AGGCGTCAAC CTGGCTTGGA ACGCTTTTGA AATGCTTGCT
CCGCAAAAAC AATACATTCG AGATCATGTT GTGGCCGCAA AGGATACCCA AACAGCCTAT
GCGCAACAGT TCAACTTAGG TCAACGCAGT CTACTCGACT TATTGGATAC CGAAAATGAG
CTCTTCGAAG CACGTAAAGA CTACTTACAA GCCGAATATG ACGAGATCAT CGCTAAGTAT
CGCGTGCTAA ATTCTACTGG ACGCTTATTA GACTCACTCA GAGTCACCAG ACCTGAAGCA
TGGCGTGGTG AGCGCAACTA TGAAGGAGGA GCTAACTAA
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| Protein sequence | MKTSARRQFQ CSKIAIVLSL ILLPLSAQSQ TLEQAVAHTL DTNPDLRVAF NRFKAREEQV
NQAIAGYMPT IDVTGGYGYE QTDSVSTRRR PNVGEVDSKG VAELNRGEFG VSLKQMLFDG
FYTSSEVDRY SFEASADQWA LLAAAEDMAL DVSKVYLNYL RTDEVLKLAE KNLNSHKEIY
DQIKQRTDSG LGSIADLSQI TGRLARANAN VISARNNLLD AKAQYIRIVE SAPADLILPV
PDADMLPKDL SSGIIEAQEN HPILKSAAND IRAAENERSS VQSNYYPQVS LELNGNWNND
VGGEDGISGA GAFRSDVGGY SNDLMAMVRV KYNLFSGGKD LAREKETAYK LGEAKEIRQR
AQREVVEGVN LAWNAFEMLA PQKQYIRDHV VAAKDTQTAY AQQFNLGQRS LLDLLDTENE
LFEARKDYLQ AEYDEIIAKY RVLNSTGRLL DSLRVTRPEA WRGERNYEGG AN
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