| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3893 |
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| Symbol | |
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| ID | 5755708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | - |
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| Start bp | 4587519 |
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| End bp | 4587791 |
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| Gene Length | 273 bp |
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| Protein Length | 90 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641290235 |
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| Product | RNA chaperone Hfq |
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| Protein accession | YP_001556313 |
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| Protein GI | 160876997 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1923] Uncharacterized host factor I protein |
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| TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0570071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTAAGG GGCAATCTTT ACAAGACCCA TTTTTGAACG CATTGCGTCG CGAGCGCGTT
CCTGTATCAA TTTACTTGGT GAACGGCATT AAACTCCAAG GACAGGTAGA GTCGTTTGAT
CAATTTGTCA TTCTGTTGAA AAACACAGTG AGCCAAATGG TTTATAAACA CGCTATTTCT
ACTGTCGTGC CAGCACGCCC ATTCAACGTC ACTGGTCACC AAAATGCCCA AGGCGGGTAT
GGTGCTCAAG ATGATGCGCC TAGTGGCGAA TAA
|
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| Protein sequence | MAKGQSLQDP FLNALRRERV PVSIYLVNGI KLQGQVESFD QFVILLKNTV SQMVYKHAIS
TVVPARPFNV TGHQNAQGGY GAQDDAPSGE
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