Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_3793 |
Symbol | |
ID | 5755607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 4471739 |
End bp | 4472362 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641290134 |
Product | short chain dehydrogenase |
Protein accession | YP_001556213 |
Protein GI | 160876897 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATAG TCGTAGTGGG TGCATCAGGC ACAATCGGAC AAGCGATAGT CCGCTTATTT CATTCAACTC AGCATGAAGT GATTCAGGTA GGGCGAACAA CGGGGGATGT CCTGATAGAC ATTCGGGATG AACATTCACT CCATCAAGGG TTAGAAAAAA TCGGTAAAGT CGATGCAATG ATTTCAGCCA TGGGAGACAT CGCCTTTAAA CCCTTTGCCC AACTCGACCA AGCCGATTGG CAAAAAGGCA TACAGAGCAA ATTGTTAGGC CAAATCCAGT TAGTGCAAAT TGGCAGTCAG TTTTTAAATG CGGGCGGCAG TTTTACCTTA ACCAGTGGCA TTATCGCCGA TGTCCCAGTA AAAGATGGCG TTAGCGCCGC CACCATAAAC GGCGCACTTG AGCATTTTGT TACCGCCGTC GCGGGAGAAT TACCTGCACA GCAGCGAATA AACATTGTCA GCCCAACGGT ATTAAGCGAG TCGTTAGCGA GCTATCAGGA CTATTTTCCC GGTTTTAGTG CGATCAATGC CGACACATTA GCCAAGGTTT ATTTGCGCTC AGTCATGGGC AGAGAAAACG GCCGAGTGCT GAAAGCCTTT TCCAGCTGCG GCGCAGTGTC CTAA
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Protein sequence | MKIVVVGASG TIGQAIVRLF HSTQHEVIQV GRTTGDVLID IRDEHSLHQG LEKIGKVDAM ISAMGDIAFK PFAQLDQADW QKGIQSKLLG QIQLVQIGSQ FLNAGGSFTL TSGIIADVPV KDGVSAATIN GALEHFVTAV AGELPAQQRI NIVSPTVLSE SLASYQDYFP GFSAINADTL AKVYLRSVMG RENGRVLKAF SSCGAVS
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