| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3780 |
|---|
| Symbol | |
|---|
| ID | 5755594 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 4455766 |
|---|
| End bp | 4456683 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641290121 |
|---|
| Product | alpha/beta hydrolase domain-containing protein |
|---|
| Protein accession | YP_001556200 |
|---|
| Protein GI | 160876884 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0657] Esterase/lipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAAC TCTATTTAGA AGATGGAATT AAACAATTGG TTAGCGAGTT TATCGCGGCG
GGTTGCCCAT CGGTGCGAGA GCAAACCATT GAGCAACGTA GGCAAGGTTA TATCGCCAGC
ACGGTACTCG CAGGTGAAGC GGAAGACGTG TTCGAGGTGC GCGCAGTTTC CATCGATGGC
GCAGAATTGA CCCTGTTCAA ACCTTCGGCG GCAAACGATT TACCCGTTGT CATTTATTAC
CATGGCGGCT GTTTTGTCAG TGGCGGCGTT GAAACCCACA ATCAACAACT TCGTAAACTT
GCTAATGATG CTGGCGCACT GGTGATTGCC GTTAGCTATC GTCTCGCCCC AGAATATGTT
TATCCAGCCG CCCACGACGA TGCCTGCCAT GCCGCCGAGG TCATTTATGC GCATTGCAAA
CAATGGGGTG GCGATAAGGA CAAGATTACC CTGATGGGCG ACAGCGCCGG CGGCCATTTA
GCCCTCGTCA CTTGCCTACG TTTAAAAGCC AAAGGGCAAT GGTTGCCACA AAAACAAGTA
CTTATCTATC CAATGCTCGA TGCCACCGCT AAAAGCCAAA GCTATAGCGA CAATGGCGAG
AAATACATCA TCACCCGCGA CACCTTACTC ACTGGATTTG ATCTGTATTT AGATTGGCAC
CCCAGAACCG ATGCCGAAGC CAGTCCGCTG CGAAGCACTG ACTTAGCGGG ACTGCCCGAA
ACCCATATCA TCACAGCTGA ATTTGATCCG CTCGTCGATG AAGGAGAACA GCTATTTAGG
CATCTATTAG AGGCTGGCGT GAATGCCCAC TGCCGCCGCT ATCTTGGGGT GATCCATGGC
TTCTTCCAAC TCTCGGGAGT GAGCCGTTCC GCTCGGGATG CCATGGTGCA AGTGAGCAAT
ATAGTGAAGA CAGCCTAA
|
|---|
| Protein sequence | MSQLYLEDGI KQLVSEFIAA GCPSVREQTI EQRRQGYIAS TVLAGEAEDV FEVRAVSIDG
AELTLFKPSA ANDLPVVIYY HGGCFVSGGV ETHNQQLRKL ANDAGALVIA VSYRLAPEYV
YPAAHDDACH AAEVIYAHCK QWGGDKDKIT LMGDSAGGHL ALVTCLRLKA KGQWLPQKQV
LIYPMLDATA KSQSYSDNGE KYIITRDTLL TGFDLYLDWH PRTDAEASPL RSTDLAGLPE
THIITAEFDP LVDEGEQLFR HLLEAGVNAH CRRYLGVIHG FFQLSGVSRS ARDAMVQVSN
IVKTA
|
|---|
| |