| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3746 |
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| Symbol | |
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| ID | 5755560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | - |
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| Start bp | 4413174 |
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| End bp | 4413944 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641290087 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001556166 |
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| Protein GI | 160876850 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.43387 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGAGCA GCAATTCTTT GCCCTTTGAA GTGGTCGGCC TCATAATATG GCAGTTTTCT
TTATTGAAGT TGAGTATTAA CGTGCGTTTA GACAAATTTA TCTGTGAGAG TACCCCACTG
ACTCGCTCAT TAGCGAAAAA AGCCCTGCAT CGCGGTGATA TCACTTGCGA TGGCATAGTC
GTCAAAGACT CGGGCTTTAA AGTGACTGAA GGTATGCGTG TTTGTCTCGA GGGCGAGCCT
ATTGCCTTAG TGGGCGTACG TTATTTAATG CTCAACAAAC CAGTCGATAC GATTTGTTCA
ACGATTGATG AAACCTATCC ATCGGTATTG AGCTTAGTGG ATGTGCCCAA GCCTGAAACC
TTGCACATTG CTGGTCGTTT AGATGCCGAT ACCACAGGGC TAGTGCTGAT CACTACCGAC
GGCCAGTGGT CGCATAAAAT TACTTCACCG AAGAAAGAAT GCGGTAAACG CTATTTAGTG
CAACTCGCCG ATCCTGTGGA TGCCGGCTTG ATTGCAGTAT TTGCCGCTGG TGTTGAATTG
CGCGGTGAAG ATGGCTTAAC TAAGCCTGCA TTGCTGGAGA TTATTGAGCC GCAATTAGTG
CGACTCACCA TCACTGAAGG TAAGTACCAT CAAGTGAAAC GTATGTTTGC TGCGGTGGGC
AACCACGTGC AAGGATTGCA CCGTGAAAGT GTCGGCCAAA TTGAATTAGA TCCCGCCTTA
GCGCTGGGTG AATGGCGTTA TTTGACCGCC GAAGAAATAG CATCAGTTTA A
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| Protein sequence | MLSSNSLPFE VVGLIIWQFS LLKLSINVRL DKFICESTPL TRSLAKKALH RGDITCDGIV
VKDSGFKVTE GMRVCLEGEP IALVGVRYLM LNKPVDTICS TIDETYPSVL SLVDVPKPET
LHIAGRLDAD TTGLVLITTD GQWSHKITSP KKECGKRYLV QLADPVDAGL IAVFAAGVEL
RGEDGLTKPA LLEIIEPQLV RLTITEGKYH QVKRMFAAVG NHVQGLHRES VGQIELDPAL
ALGEWRYLTA EEIASV
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