Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_3523 |
Symbol | |
ID | 5755337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 4140747 |
End bp | 4141520 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641289866 |
Product | extracellular solute-binding protein, family 3 |
Protein accession | YP_001555945 |
Protein GI | 160876629 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTAG TCACAAACTT TTTGCTATCA CTTATCCTCT GCTGCGCTTT CTCCCTGAGC GCACAGCCGC TAAACATCTA TACGGAAGAA TGGTCACCGA TCAGTTTTTC TGTTGATGGC AAACCTGCTG GTTTAGCAGT ACAAGTCGTA GAAGAAATTC AAAAACGCAT CAAGAGTCCA GATCCAATTA AAGTCGTACC TTGGGCTCGC GGCTGGAAAA TGCTGACCGA GCAGCCCAAC ACTGTGTTGT TCACTATGAC GCGCACTGCT GAAAGGGAAC AGATGTTTAC TATGATAGGA CCCGTTGCTG TCGGCACGAC CAATTTTTAT GCCTTAAAAA ATAGCGGCAT AAAAATTACC TCGATAGAAG ATGCTAAAAC GGCGAAGGCA ATTGGCGTCT ATCGTGCCTC AGTGGAGGAG CGCTTGCTTA CCGAACACGG CTTTACCAAT GTCGCCGCCT CATCAACGCC CTTGTTAAGT GCGAAACAAT TGATGAAGCA CCGTATCGAT CTTTGGTGTA ATGCCAATCT CACTGCGCCA AGTATTTTGT CGGATGCGGG CGCCAGTATT GATGATGTAG AGTCCCTCTT CACGATTAGC GCTAATCATC TTTACATTGC CTTCTCACAA GGCACGCCCA ATGAGGTGAT CGAGCAGTGG AAAAATGCTC TAGAAGCGCT AAAAGCGGAT GGCACCTTCG CGACGATTTA CCATACTTGG CTCCCCAACG ATGCGCCGCC AATGCAGACC GAACGTATCG GGCTGGGCAA CTAA
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Protein sequence | MKLVTNFLLS LILCCAFSLS AQPLNIYTEE WSPISFSVDG KPAGLAVQVV EEIQKRIKSP DPIKVVPWAR GWKMLTEQPN TVLFTMTRTA EREQMFTMIG PVAVGTTNFY ALKNSGIKIT SIEDAKTAKA IGVYRASVEE RLLTEHGFTN VAASSTPLLS AKQLMKHRID LWCNANLTAP SILSDAGASI DDVESLFTIS ANHLYIAFSQ GTPNEVIEQW KNALEALKAD GTFATIYHTW LPNDAPPMQT ERIGLGN
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