Gene Sbal195_3523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_3523 
Symbol 
ID5755337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp4140747 
End bp4141520 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content48% 
IMG OID641289866 
Productextracellular solute-binding protein, family 3 
Protein accessionYP_001555945 
Protein GI160876629 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTAG TCACAAACTT TTTGCTATCA CTTATCCTCT GCTGCGCTTT CTCCCTGAGC 
GCACAGCCGC TAAACATCTA TACGGAAGAA TGGTCACCGA TCAGTTTTTC TGTTGATGGC
AAACCTGCTG GTTTAGCAGT ACAAGTCGTA GAAGAAATTC AAAAACGCAT CAAGAGTCCA
GATCCAATTA AAGTCGTACC TTGGGCTCGC GGCTGGAAAA TGCTGACCGA GCAGCCCAAC
ACTGTGTTGT TCACTATGAC GCGCACTGCT GAAAGGGAAC AGATGTTTAC TATGATAGGA
CCCGTTGCTG TCGGCACGAC CAATTTTTAT GCCTTAAAAA ATAGCGGCAT AAAAATTACC
TCGATAGAAG ATGCTAAAAC GGCGAAGGCA ATTGGCGTCT ATCGTGCCTC AGTGGAGGAG
CGCTTGCTTA CCGAACACGG CTTTACCAAT GTCGCCGCCT CATCAACGCC CTTGTTAAGT
GCGAAACAAT TGATGAAGCA CCGTATCGAT CTTTGGTGTA ATGCCAATCT CACTGCGCCA
AGTATTTTGT CGGATGCGGG CGCCAGTATT GATGATGTAG AGTCCCTCTT CACGATTAGC
GCTAATCATC TTTACATTGC CTTCTCACAA GGCACGCCCA ATGAGGTGAT CGAGCAGTGG
AAAAATGCTC TAGAAGCGCT AAAAGCGGAT GGCACCTTCG CGACGATTTA CCATACTTGG
CTCCCCAACG ATGCGCCGCC AATGCAGACC GAACGTATCG GGCTGGGCAA CTAA
 
Protein sequence
MKLVTNFLLS LILCCAFSLS AQPLNIYTEE WSPISFSVDG KPAGLAVQVV EEIQKRIKSP 
DPIKVVPWAR GWKMLTEQPN TVLFTMTRTA EREQMFTMIG PVAVGTTNFY ALKNSGIKIT
SIEDAKTAKA IGVYRASVEE RLLTEHGFTN VAASSTPLLS AKQLMKHRID LWCNANLTAP
SILSDAGASI DDVESLFTIS ANHLYIAFSQ GTPNEVIEQW KNALEALKAD GTFATIYHTW
LPNDAPPMQT ERIGLGN