| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3448 |
|---|
| Symbol | |
|---|
| ID | 5755261 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 4068988 |
|---|
| End bp | 4069482 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641289790 |
|---|
| Product | rare lipoprotein B |
|---|
| Protein accession | YP_001555870 |
|---|
| Protein GI | 160876554 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2980] Rare lipoprotein B |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.124406 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.000604669 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCTAATCA AACGCATATG CTTCGCAATC ATGGCGCTAG TGATAATGAC CAGCGCCGGT
TGCGGTTTTA AGCTTCAACG CAGTTATCAG ATCCCCGATG TTCTCAATCA TTTGAGTTTG
AGCAGCGCGG ATGAATACAG CGAACTCACC CGTTTGGTGC GTGAACGCCT GCGCTTGAAC
AATATCCAAG TTGTCGACGC CGCCGATGAC GTTCCAGTAT TAAGATTAAT AACCGACTCC
CTAGAACGCT CGACCTTATC TTTATACCCC ACAGGTAACG TCGCCGAGTA TGAGCTGATT
TATTTAGTCG AATTTGCTGT GGCATTGCCG GGCAAAGAAG CGCAGCCTTT CAAGGTTGAA
ATTCGCCGCG ACTACTTAGA CGATCCACGT ACCGCATTAG CAAAGAGTCG TGAAATGGAA
TTGCTGACGA AGGAAATGCG TATCCAAGCT GCGGATCGTA TTCTGCAAGC GATGGCCAGT
ACTGAGGTGA ATTAA
|
|---|
| Protein sequence | MLIKRICFAI MALVIMTSAG CGFKLQRSYQ IPDVLNHLSL SSADEYSELT RLVRERLRLN
NIQVVDAADD VPVLRLITDS LERSTLSLYP TGNVAEYELI YLVEFAVALP GKEAQPFKVE
IRRDYLDDPR TALAKSREME LLTKEMRIQA ADRILQAMAS TEVN
|
|---|
| |