| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3375 |
|---|
| Symbol | |
|---|
| ID | 5755179 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 3987628 |
|---|
| End bp | 3988989 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641289708 |
|---|
| Product | CRISPR-associated Csy1 family protein |
|---|
| Protein accession | YP_001555797 |
|---|
| Protein GI | 160876481 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02564] CRISPR-associated protein, Csy1 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00233516 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTAA CTTTAAGCGA TGCGCTTGCC GATTATATCG CTCAGCGTAA GCAAACTAAG
CTTGAACCGC TACAAAAAGC ACGGGATAAG ATGCTTGAAA AAACACAGGA GCCTATCGAA
ATAGCAACAG CAAATAGGGA ATATGCTGAA GCTGCTGCAC CGATTGAGGC GGATTTTAAT
CCGGTGAATT GGTTAACTGA TGCTGCAAAA CGCGCCAAAC AGATTAGTCT AGCAACCCAT
GCGGCTAAGT TTACCCACAG TGATGCTAAA GCCAGCAGTA TATTGGTAGC GGATACTGCG
CCAGAATCGC AGACCTATCT GAACACGGCG AGTCTAGCGA ATAAAGCGAT AGATGCTGTC
GGTAATGCGG CGGCACTTGA TGTGGCAAAA CTGCTGAAAA TATCAGTCAA TGGCGAAAGT
CTCATCAAGC AGCTACAAGC TCAGCATGTC GATGCTTTAA CTGCATTTAC TCAAGATACT
GAATTACTTA AAGAGTGGCA GCTTGGATTT GCTAGAGCAT TGGCAGATGA AAAACTAACG
GGACATACCT TAACTAAGCA ATTGTACTTT CCAGTATCAA CGGCGCTTAA TGGCGATGAA
TCACAACACT ATCACTTACT GTGTCCTTTG TTTTCTTCAT CCTTAGCCCA TGAGTTATAT
CATCACGTCA CATCAACTCG TTTTGGCGAT GAGCCCAAAG CAATTAGAGA GGCGCGTAAA
AAAGGTCATT ATCACGCATC GCTCGAGAAG ATATTCCCGG CAACAGCAGT GCAAAACTTT
GGTGGCTCAA AACCACAAAA TATCTCTCAA CTTAATAGCG AGCGGTATGG ACAAAGTTTC
TTACTCAATT GCGCGCCACC GCATTATCAA GCTCAAAGCA AGCCGCCGCT CACGAGTGCC
AGTATTTTTA GCCGCCAATT GCGGTTTAAA ACCGCAGGTT TTATTCGCGA ATTTAAAGCG
TTTTTGGCTG GGGTAACCGC GCAAGAAAAC AATTTTAAAG CGCGATATCA ACGGGATTAT
GGTTTTGTGT TGCCAATTAT CGATGTGCTA CTTAATGAGG CCGCCATTAT TCAAAATATG
ACGGAATTTG CAGGTTGGGC AACGTCGGCT GAGTGTCAAT TAAAAACCGC GCACGGTCTT
TGGCTCGATG TCGCCAACCC AGAACCTCGT TTTCAGCAGG AGCGTGCCAA AGGCGATTGG
CAAGACATCA TCGCCAACGA TTTTGCGACT TGGTTATTGG CTCAGCTGCA AAATAAAGAA
CGATATGTGC TAGGTGATAT TGAACATCAG TATGTTAAGA AATTATGTCT AGTGCAGCTT
AAAACCTTTG AGCGTCATAC ACCTAAACAT GGAGATGCAT AG
|
|---|
| Protein sequence | MELTLSDALA DYIAQRKQTK LEPLQKARDK MLEKTQEPIE IATANREYAE AAAPIEADFN
PVNWLTDAAK RAKQISLATH AAKFTHSDAK ASSILVADTA PESQTYLNTA SLANKAIDAV
GNAAALDVAK LLKISVNGES LIKQLQAQHV DALTAFTQDT ELLKEWQLGF ARALADEKLT
GHTLTKQLYF PVSTALNGDE SQHYHLLCPL FSSSLAHELY HHVTSTRFGD EPKAIREARK
KGHYHASLEK IFPATAVQNF GGSKPQNISQ LNSERYGQSF LLNCAPPHYQ AQSKPPLTSA
SIFSRQLRFK TAGFIREFKA FLAGVTAQEN NFKARYQRDY GFVLPIIDVL LNEAAIIQNM
TEFAGWATSA ECQLKTAHGL WLDVANPEPR FQQERAKGDW QDIIANDFAT WLLAQLQNKE
RYVLGDIEHQ YVKKLCLVQL KTFERHTPKH GDA
|
|---|
| |