| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3354 |
|---|
| Symbol | |
|---|
| ID | 5755158 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 3958482 |
|---|
| End bp | 3961544 |
|---|
| Gene Length | 3063 bp |
|---|
| Protein Length | 1020 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641289687 |
|---|
| Product | multi-sensor hybrid histidine kinase |
|---|
| Protein accession | YP_001555776 |
|---|
| Protein GI | 160876460 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR02956] TMAO reductase sytem sensor TorS |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCTCCTT TATCTTTATC GCGAACCAGT TTAACCGGTC GATTAATGCT CGCCTTCAGT
GTGTTAGGCG TATTGCTGAT GCTGCTTGTT AGCTTAGGTA GCTTAAGTCT ACATTGGCTA
AAACAGGCCG ATAGTTACTT GTACGAAGAG TCACTCCCCG CATCCCAAGC GGCGAGGCAG
CTAGTGCAAG CTTCTAATGC CTTGTCCGAT GGTGTGCAGC AGTTAGGGCG GGTAGAAGAT
GAGCGTCAAC GGGAGTTTAT TGGTCGTAAA CTGAGCCTTG AAAGTGTCAA TATGTTTAAT
GGCATCAAAA CCTTAACCAT ATTGGATGTT AACGAAGGCC AAAATCTTAA CCAGCTGGCC
GAACAAATCA TCAGCCAATT AACCTCACTT GGCAAAAGTG TGGGTAGGCG TTTGACCATG
GGCGATGAGT TGCAGCTCAA GGCTCATGAA TTGTCCATCG CCGCAGGACA TGCCTCCGAA
TTACTTCAAT CTGAGCTCGC CGTCGTGAAT TCTGCCATCT TGGCGAAGTT GAGTCAGGCC
TATCCTGATA TGGCAGGCGC GAAGCGCAGC GGCCGATTAC TCGACGATGT GATTGAGGGC
GAACTTGATA TTCAAGAGCA GCTCAATCGT GCCCTTAAGT TAGTTCATCA AATTGCCTTG
TTAAGTCAGT TATTTGAATC CTCCGAATTG CAGTCAGAAT TGCAAGTAAG TGTGCCGAAT
TTGCTGGCGA CGTTTGCAAG CACGAATCCT TCCCCGAGTT TTACGCTTCC CGAGCCTGAG
ATGGCGACGG CAATGGACAG GGCGCTTGCC CATAAGACGG ATTCAGCGCC TGCTTCGAGT
GACATCAATA TCGATTTGAT GGCACTCGAT AATGTGCCCG AGATAATTCG CGATCCGGGG
CGTTTGCAGG CGTTAAAAAC CGAATTAGCA GTGTTAGCGC ACACACCACA AATCATTAAA
TTACAGCGGG AATTAAGCCA AACACTGCAG CAGCAACAGC GTCAGCAGCA AGAATTAGCC
GAAAAACTTT ATGGACTCAA TACGCTGGTG GATAGAGCCC TAAATCAACA GCAACAACAG
GCGGAATTGG CTCGTAGTGA TTATCTACAC CAATTGTCCC TTGCTAGGTT TGGGCTTTGG
GGCACAGGTG CCTTGATGTT TGTGGTGATT GGCTTTGTGA TCTATCGAGT GATTTATCGC
GGTATCGCCC TTAGGTTAAA TCAGGCGACC GAGGCTATGT CCAGCTTGAG CTTAGGTGAC
ACGAACGTGA GTTTAGAGGC CCACGGAGAT GATGAACTGA CTGCGATGGC AAATGCTATC
GAAGCCTTCA AGCGTAAAAC TGCCCATAAT CTTAAATTAC AGGCTGATTT ACGTCAGGTG
GCAGATGAGT TGACCGAGCA TAAAAAGGCG TTGGAGCAAA CGGTTGCTGC CCGTACGCAA
GAATTGGCAG AGACCAATAA TCGCCTCGAT GCCGAAGCCA AGGGCCATGC TAAAGCAAGG
CAAATAGCTG AAGAGGCGAG TCAGGCAAAA TCCCAATTCC TTGCGACCAT GAGCCACGAA
ATTCGTACGC CTCTCAACGG TTTACTCGGT ACATTAACTT TGCTCGGTCA CAGTGAACTA
CCGCCAGCGC AGCAGCAAAT GTTAGCGCTA TCGCAATATA GCGGCACTTT ATTGCAAACC
GTGTTGAACG ACATTTTGGA TTTTTCGCGC CTTGAACAAG GGAAACTCAG CCACGAGCCA
AGGCCGACCG ATATCAATAC CTTGCTCGAT GAAGTGCTGG CGATCATGGT TGCGGGTGCA
AATTTAGCTG GGCTCAGCCT CAAAATGAAC AAGCCTAAGT TACCAAGCTG CATCAATATC
GATGGGCCTA AGTTGCGCCA AGTATTGTTC AACCTAATCG GCAATGGCAT TAAATTTACG
CAAGAGGGCT GCGTGACGCT AACTGTTAGT CTGCAAGGCA CTCAACTGTC TTTTGTTGTG
CAGGACACGG GCGTTGGTAT TGTGCCTGCG GCACTTGATA AACTTTTTGT GCCCTACAGT
GCTTTACCTA ATCAAGGTCG CAGTCGCGGC ACGGGTTTAG GGCTCGCCAT TTGTAAGCAA
TTGGTTGAGT TAATGGATGC TAGCGGCCGC GGGATTTGGG TTAAAAGTCA GCCAGGAAAA
GGCAGTGAGT TTGGTTTTGA ACTCGCCTTT AATGAATGCG ATATGACCAA TAACCAAGCG
GTAAAAGAGA GGGTGTTAGT GTCTGCTCGC CAAGTGATGG TGGTAGAAGA CAATAAAGTG
AATGCTATGG TGGCGCAGGG ATTTTTAGCG CACTTAGGTC ACAAGTCAGT TCTTGCTGTC
AGTTGCCAAC AGGCGCTTGA ATTTGTCGAG TCTAGCGGTT TGGTTTTCGA TGCTGTGTTG
CTGGATATTC AGCTCAGTGA TGGTTCTGGA ATCGATTTAT TGCCGCAGTT AAAAAAGTTG
ATCGCCAATC CTAATGTGAA GTTTGCCGCC TTTACCGCCC AAATGCAGAG CGAGGATTTA
CAGCATTACC GCGAGGCAGG ATTTGATGCT GTATTGGCTA AGCCCCTAAG TCTACAAACC
CTTACAGAAT GGCTTGGTGT TGCGGTTTCT CCCTTTTCTG CATCCATTTC ATCATCGACC
GTGAATGACC TGTTGTCTGC GCCGCCTCAA GTCACAACGG AAACTAAGAT TGCAACGACA
ATAGCGGATG TCGATGATGA GCCGTTATTA GATCTCAAGC AGTTAGTGCA GGATAAGGAT
GTACTCGGCA GCGAAGCTAT GATGTCTATG CTCGATCTTT TTAGTGATTC GAGTCGTGAG
CAGCTTGCCA AACTGTCTCT AGCTAATCCC AAGGAAGAGG TCGCCAAATT GCTGCACGGG
CTTAAGGGCA GCAGTGCCAG TATGGGATTG ATAGCGTTAG CTAAATTATG TAAGGAGTTA
GAGCTGGCGC TAAAAGCCAG TGCAGATAAC GCGTTGGAGC TTAGTGAATT TCAACGCCTT
GAGTCTTGCC GGCAGGCATC CATTGCCGCC TTGAGCCAAT GGTTAGCTGC ACAAAACGAC
TGA
|
|---|
| Protein sequence | MAPLSLSRTS LTGRLMLAFS VLGVLLMLLV SLGSLSLHWL KQADSYLYEE SLPASQAARQ
LVQASNALSD GVQQLGRVED ERQREFIGRK LSLESVNMFN GIKTLTILDV NEGQNLNQLA
EQIISQLTSL GKSVGRRLTM GDELQLKAHE LSIAAGHASE LLQSELAVVN SAILAKLSQA
YPDMAGAKRS GRLLDDVIEG ELDIQEQLNR ALKLVHQIAL LSQLFESSEL QSELQVSVPN
LLATFASTNP SPSFTLPEPE MATAMDRALA HKTDSAPASS DINIDLMALD NVPEIIRDPG
RLQALKTELA VLAHTPQIIK LQRELSQTLQ QQQRQQQELA EKLYGLNTLV DRALNQQQQQ
AELARSDYLH QLSLARFGLW GTGALMFVVI GFVIYRVIYR GIALRLNQAT EAMSSLSLGD
TNVSLEAHGD DELTAMANAI EAFKRKTAHN LKLQADLRQV ADELTEHKKA LEQTVAARTQ
ELAETNNRLD AEAKGHAKAR QIAEEASQAK SQFLATMSHE IRTPLNGLLG TLTLLGHSEL
PPAQQQMLAL SQYSGTLLQT VLNDILDFSR LEQGKLSHEP RPTDINTLLD EVLAIMVAGA
NLAGLSLKMN KPKLPSCINI DGPKLRQVLF NLIGNGIKFT QEGCVTLTVS LQGTQLSFVV
QDTGVGIVPA ALDKLFVPYS ALPNQGRSRG TGLGLAICKQ LVELMDASGR GIWVKSQPGK
GSEFGFELAF NECDMTNNQA VKERVLVSAR QVMVVEDNKV NAMVAQGFLA HLGHKSVLAV
SCQQALEFVE SSGLVFDAVL LDIQLSDGSG IDLLPQLKKL IANPNVKFAA FTAQMQSEDL
QHYREAGFDA VLAKPLSLQT LTEWLGVAVS PFSASISSST VNDLLSAPPQ VTTETKIATT
IADVDDEPLL DLKQLVQDKD VLGSEAMMSM LDLFSDSSRE QLAKLSLANP KEEVAKLLHG
LKGSSASMGL IALAKLCKEL ELALKASADN ALELSEFQRL ESCRQASIAA LSQWLAAQND
|
|---|
| |