| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3334 |
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| Symbol | |
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| ID | 5755138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | - |
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| Start bp | 3932089 |
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| End bp | 3933582 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641289667 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001555756 |
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| Protein GI | 160876440 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGAAA TCGGGTTAGT TGTTGCTTCT CTCATTTTAT TGATATTTTC ATTATATATA
CTGCAGGCAA AATATAGATC GCAACGGTCA CAGCAAAAAT TCTTAGCTCA ACTTTGTCTC
CAGCTAGAGC AACAAAAGGT TGAGCGCCAA GCATTAAACC TTGGCACGGT TCCCCAAGAG
TTTGCGCCTC TCTACCATAC CTTAGATGAA TTATTGAAGG CCTTACCCGC AAGCGCAGGT
AAAGACAAGT TGACTGGACT AGTGAATCGC GTCGGCCTTA AACGTACGCT GACCTCCATG
ATGCCGCTGA CTCAAGGGAC ATTAGTGCTG ATTGATATTT ATCGATTTCG CTATGTGAAT
GATCTCTTTG GGTTTGTGTT TGGCGATATC CTGCTAAAGC AATTTGCGGA ACGGATAAAC
ACCTTAAGTT TATCCCCAAG GTTAATCGCA CGGCTCAATG GTGATGAATT TTGCCTATAT
TACGAGCAAG CGTTGACGGA GGAGCAATTA GTCCATTTAA GAGGCCGTTT GCAGGTGCCT
TTTAGCATTA AGAACACGCC AGTCAGCGTT AAACTTCAAA TCGGCTGTGT GCATTTACAA
GAACACCACG CCGATACGAG CCAGATGTTA CGTCGCGTCG ATTTGGCGCT GAAGAAAGCC
CGTCACTCTC GTAGCGCGAT TGCTTACTAT GCCGAGAATG ATGATATTCA ACAGTTAAGA
GAACTGAGAA TTATCGATAG CTTGCCTAAA GGTTTGCAAC GCAATCAAGT GTATATGGTG
TATCAAGCGA AACAGGATAT TGCGACGGGA AGGTGTTTTC AGGTTGAAGC CTTGATGCGC
TGGGAACACG ACGAACTTGG GGTTATTTCT CCAGGTGAGT TTATCCCTTT AGCCGAATAT
GCCGGCATGA TTGATTTAGT GAGCCAATGG GCACTCGATC AGGTTTTAGC GCAGCAGGAA
AAATGGCGCG CCGCAGGGAT ACAATTGTGC GTCGCAGTCA ACCTATCTAC ACGGGATCTC
GACAGTGAAA CCTTGCCCCA AGAAATTGCG GCGAGATTGG CGCATTACAA GCTTCCGCCC
GAATCCTTAA TGATTGAAAT TACGGAAAGT ACCTTAATGG CGGATTTAAC TAAGGCGGTC
GAAACCTTAG ATAAAATTCG TGCTTTAGGG GTGAGGCTCG CAATTGATGA TTTTGGTACC
GGTCATTCTT CACTGGCTTA CTTGAAGCAT CTACCCGTCA ATGAAGTCAA AATCGATAAA
GCTTTTCTAA AGGATCTTGA GCAGGATAAA CCGTCGGAAT ATATCCTCGA AGCCAGTATT
AATATTGCTA AAAAACTCGG TTATGAGGTG ACTGTCGAAG GGATTGAAAC CCCTGAAATT
AGAGAGATAC TCGTCGCTAT GGGCGTCGAT ACCCTACAAG GCATGTATTA CGCTAAGCCC
ATGAGAGCTG CAGAACTGGA AATGAACTGG GCCCGGCTGC ACAATGCCAT GTAA
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| Protein sequence | MFEIGLVVAS LILLIFSLYI LQAKYRSQRS QQKFLAQLCL QLEQQKVERQ ALNLGTVPQE
FAPLYHTLDE LLKALPASAG KDKLTGLVNR VGLKRTLTSM MPLTQGTLVL IDIYRFRYVN
DLFGFVFGDI LLKQFAERIN TLSLSPRLIA RLNGDEFCLY YEQALTEEQL VHLRGRLQVP
FSIKNTPVSV KLQIGCVHLQ EHHADTSQML RRVDLALKKA RHSRSAIAYY AENDDIQQLR
ELRIIDSLPK GLQRNQVYMV YQAKQDIATG RCFQVEALMR WEHDELGVIS PGEFIPLAEY
AGMIDLVSQW ALDQVLAQQE KWRAAGIQLC VAVNLSTRDL DSETLPQEIA ARLAHYKLPP
ESLMIEITES TLMADLTKAV ETLDKIRALG VRLAIDDFGT GHSSLAYLKH LPVNEVKIDK
AFLKDLEQDK PSEYILEASI NIAKKLGYEV TVEGIETPEI REILVAMGVD TLQGMYYAKP
MRAAELEMNW ARLHNAM
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