Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_3184 |
Symbol | |
ID | 5754976 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 3756047 |
End bp | 3756865 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641289505 |
Product | pyrroline-5-carboxylate reductase |
Protein accession | YP_001555606 |
Protein GI | 160876290 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000288321 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0381756 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCAAC AGAAAATCTG CTTTATCGGT GCCGGCAACA TGACGCGCAG CATCATCAGT GGCCTAGTTC ATAGCGGCTA TCCTGCTCAA CTCATCCAAG CGACCAATCC TAGCCAAGGT AAACTCGACG CACTAAAAGC CGATTTAGGG ATTTTGGTTT CTCAAGACAA TTTAGCCGCA GCGCAAGCTG CCGATGTCAT AGTGCTGTCG GTAAAACCGC AATTGATGCA GCAAGTGTGT GAAGCATTAC AAACTGTCGA CATGTCGCAA AAGTTAGTCA TCACTATTGC TGCAGGCATT AAAGCAAAGC GTTATACCGA TTATCTGGCG CAGGATATTA AGCTTATCCG CGCTATGCCC AATACACCGA TGCAGATTAG TGTGGGCATG ACTGGCCTCT ATGCGCCTCA GGCTATTTCT ACCGAGCAAA AAGCCATTTG CGATCGTTTG ATGTCAAGCG GCGGCGAAAT TGTGTGGGTT AATGAAGAGT CAGAATTAGA TCAAGTGATT GCACTATCGG GCAGTTCACC GGCTTATTTC TTTTTGCTAA TGGAGTCTAT GATAGATGCA GGCAAAGAAA TGGGAATGGA TGAAGACAAA GCCAGAACTT TAGTGCAGCA AGCCGCGCTC GGCGCTGCTA TGATGGCAAA GCAAAATCCA CAACTGACCT TAGGTAATCT AAGGGAGAAT GTCACCTCAA AGGGCGGTAC CACCGCACAG GCGCTGGCGA CATTTGAAGC TGCGGATATG CGTGGTTTAG TAAAAAAAGC CATGGAAAAC TGCATTAAAC GTGCAGAAGA AATGGCTAAG ACATTTTAA
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Protein sequence | MDQQKICFIG AGNMTRSIIS GLVHSGYPAQ LIQATNPSQG KLDALKADLG ILVSQDNLAA AQAADVIVLS VKPQLMQQVC EALQTVDMSQ KLVITIAAGI KAKRYTDYLA QDIKLIRAMP NTPMQISVGM TGLYAPQAIS TEQKAICDRL MSSGGEIVWV NEESELDQVI ALSGSSPAYF FLLMESMIDA GKEMGMDEDK ARTLVQQAAL GAAMMAKQNP QLTLGNLREN VTSKGGTTAQ ALATFEAADM RGLVKKAMEN CIKRAEEMAK TF
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