Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_2969 |
Symbol | |
ID | 5754760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 3525733 |
End bp | 3527259 |
Gene Length | 1527 bp |
Protein Length | 508 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641289293 |
Product | 6-phosphogluconate dehydrogenase |
Protein accession | YP_001555395 |
Protein GI | 160876079 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0362] 6-phosphogluconate dehydrogenase |
TIGRFAM ID | [TIGR00873] 6-phosphogluconate dehydrogenase, decarboxylating |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.727266 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.666571 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAAACC ACAGCAATCT TAATGATATC GGCGTAATTG GCCTTGGCGT TATGGGTAAA AACCTCGCGC TAAACATCGC GGATAACCAA TATCACGTCA GCGCATTTGA TCTCGATCCT GTTAAAGTTA ATGGTGTTAT ACAGCAAGAA AAACAGGAAC GCGCTGGACT CGAACCTCGC ATTCTTGGCT GTGCTAATCT TACCGAAATG TTAGCCAGTC TCACAAAACC CCGCATTCTT GTGCTTTCTG TTCCCGCGGG CGCACCCGTC GATGGTGTCT GTAGTGCTTT GATTTCTGCC GGAATTGAGT CAGATGATAT CGTTATCGAT ACCGGTAACA GCCTATGGAC CGACACTGTT GAGCGTGAAG CGCGCTACAA AGGTCAGTTT GTATTTTTCA GCTCTGCGGT TTCGGGCGGT GAAGTCGGTG CGCGTTTCGG TCCATCACTT ATGCCAAGCG GCGATATCGA TGCATGGCAT CACGTTGCAC CTATTTGGAA AGCCATTGCC GCTAAGGTTG ATGCAAGTAC AGGTTTACCC ATAGAGCGCT TCGAACCGGG TAATCCAGTG ACAGAAGGCG AGCCATGCAC GACTTATATT GGTCCTGCGG GTTCTGGCCA TTACGTGAAG ATGGTGCACA ACGGTATTGA ATATGCTGAT ATGCAGTTGA TTTGCGAAGC CTATCAAATG CTGCATGACG GTTTAGGCAT GAGCGCTGCA GAAGTGGGCG ATGTGTTTGA ACGCTGGAAC AAAGGCAGCT TAAACAGCTA TTTGATGGGG ATCAGTGCCG AAGTCTTAAA ACAGGCCGAT CCATTAACGG GTAAACCGTT GGTGGAAATG ATCTTAGATA AAGCGGGCCA AAAAGGCACG GGTTTGTGGA CGGCCGTAAG CAGTTTACAA ATTGGTTGTC CGGCACCGAC GATTGCTGAA GCTGTATATG CTCGCGCCGT AAGTACCCAA AAATCCTTAC GTTTACAACT TAGCCAGAAA TTGGCTGGGC CAAATGCACC TGCTATCGAT GATGCGCAAA AAGCGCAGTT GATTGAAGCC CTTGAAAGTG CTTTATATTG CGCGAAAGTG TGTTGTTACG CGCAAGGCTT CCAGTTGATG GCGATGACGG CCCATGAACA AAAATGGCAG TTAGACTTTG CTGAAATTGC AAAAATTTGG CGTGCGGGTT GTATTATTCG CGCGACGTTC TTGCAATCAA TCACTCAAGC CTATGAAGAT AATGCCGATC TTAGCAATCT GTTGATGGCC GACAGTTTTG CGTCAGCCTT ATCTGAACAG CAAGGCCTAT GGCGCACTGC GGTAGCGACA GCGGTAATGC AAGGCATTCC AGCGCCGTGT ATTAGCTCAG CACTGGCATA TTACGACAGT TATCGCTGCG AAACATTACC AGCGAACTTG CTCCAAGGTC AGCGTGACTT TTTCGGCTCT CACACCTTCG AGCGGATCGA TACCCCTGCA GGCGAGAAAT ATCACTTAGA TTGGAGCGCT AAAGAGCGCA CCTTAGCTAA GGTCTAA
|
Protein sequence | MQNHSNLNDI GVIGLGVMGK NLALNIADNQ YHVSAFDLDP VKVNGVIQQE KQERAGLEPR ILGCANLTEM LASLTKPRIL VLSVPAGAPV DGVCSALISA GIESDDIVID TGNSLWTDTV EREARYKGQF VFFSSAVSGG EVGARFGPSL MPSGDIDAWH HVAPIWKAIA AKVDASTGLP IERFEPGNPV TEGEPCTTYI GPAGSGHYVK MVHNGIEYAD MQLICEAYQM LHDGLGMSAA EVGDVFERWN KGSLNSYLMG ISAEVLKQAD PLTGKPLVEM ILDKAGQKGT GLWTAVSSLQ IGCPAPTIAE AVYARAVSTQ KSLRLQLSQK LAGPNAPAID DAQKAQLIEA LESALYCAKV CCYAQGFQLM AMTAHEQKWQ LDFAEIAKIW RAGCIIRATF LQSITQAYED NADLSNLLMA DSFASALSEQ QGLWRTAVAT AVMQGIPAPC ISSALAYYDS YRCETLPANL LQGQRDFFGS HTFERIDTPA GEKYHLDWSA KERTLAKV
|
| |