| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2861 |
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| Symbol | |
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| ID | 5754639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 3409027 |
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| End bp | 3411105 |
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| Gene Length | 2079 bp |
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| Protein Length | 692 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641289172 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001555287 |
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| Protein GI | 160875971 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3064] Membrane protein involved in colicin uptake |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0393834 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTAC ATTTTATTCG CCCAGAATGG CTACTTGCAC TAGTGCCACT GGCTCTAGTG
TTGTTGAGTT TATGGCGACA ACACGAGAGC CACAGCGCGT GGAATAGGTA TATTGCGCCG
CATTTAGCCA AGATATTGGT CACCCAAGGC AGCAAGAAAT CCCGTCGTCC TTTGCATTTA
TTAGCTTTCA CTTGGCTGAT GGCGACTTTT GCGCTCGCCG GACCTGCCGT TAATAAACAG
TCCTTACCTG TGTTTGCCGC CGAGCAAGGC CGCGTATTGG TGATGGACAT GTCTGTGTCT
ATGTTCGCTA CCGATCTTGC ACCAAACCGG TTAACCCAAG CTAAATTTAG GGCTACGGAT
CTCCTGCGTA ATCTTAAAGA AGGTGAAACA GGTTTAGTCG CCTTTGCTGG CGATGCCTTT
ACTATCAGCC CGTTAACGCG CGATACCGGC ACGCTACTCA ATTTATTGCC GACCTTAAGC
CCTGAAATCA TGCCCGTTCG TGGCTCAAAC TTAGCGGCAG GTTTAACCCA AGCTAAAACG
CTACTGGCTC AGGGTGGGCA TATTCGCGGT GATATTATCG TGATGACAGA TGGCATAACC
GCAGCCCAAT TTGATGACGC TAACTCGGCA TTAAGTGGCA CGCAATATCG CCTTGCCGTC
GTCGCTTTTG GTACCAGCCA AGGCGCGCCA ATTCGTCTAC CCGATGGACA ATTGCAGCGC
GACAGTAGCA ACGAGGTCGT TGTGGCCAGC ACTGACTTTG GCCTGCTGCA AAAACTGGCA
GCGGATAACA AAGGCGTGTT AATCCAAAAT CGCACCGACG GCAATGATCT GGCCCAATTA
CAACATTGGT TAAGTGATAC GGGCGATGCC AAAGCCACAG ATCTTGACGG TGAAACCTGG
CAGGATCTCG GCCCTTATCT CGCCCTGCTA TTACTGCTGC CCGCCCTTTT CAGCTTTAGG
CAAGGAATAG TGGCAAGCGT TGGATTTGCC ACTCTCATTG GCGGTTTACT GCTCGCGGCC
GCGCCTCAGC CTGCCCATGC CAGTGTGTGG GACAATGTGT GGAAAACAAC AGATCAGCAA
GCGATGCAGG CCTATCAATC CCAAGATTAT GCCAACGCCG CTAAGCAGTT TGAGTCACCC
CAATGGCGTG GCAGCGCCCA ATATAAGGCC GGTGATTATG AGCAAGCGCT GAAAACCTTC
GAGCAAGATA GCTCAGCCCA AGGCCTCTAC AATCAAGGCA ATGCGTTGAT GCAACTCGGT
AAACCCGATA AGGCTAAGGA GCGCTATCAA GCCGCACTTG AAAAACAAGC CGATTTCCCA
GCGGCGAAGG CCAACCTTGA ACTGGCTGAA AAGCAATTGA AACAACAGCA AAAGCAGCAA
GGTAAAAACG ATCAACAGGA TAAGAACCAA GATCAACAAG GCGATCAGCA GTCCGGTGAT
TCCAATTCAG GTGACCAACA ATCTGGCGAC CAACAATCCG GTAATCAACA GTCGCAGGAT
AAACAACAAT CTGACCAAGA TAGCGCTCAG AAAGATAAGC AAGATCAAGC GGGGCAAGAG
CCTCAAGAGC AACAGGACAA TGCCAATCCT GAGCAAAGCT CTGAGCAGCA AAAAGCGGAT
GAGCAACAGT CTGAGCAAGA TAAGCAAAAT GGCAATGCTC AGGACAAGCA GGATGAAGCT
CAGCAAGATC CCGCGAAAGA TAAAGCGCAA CAGGATCAAC AAGCCAAGCA GCAAAATGCC
GAGCAGGATG CAAAGGACAA TTCACCTGTA GATAATGAAG CTAAGATGCA AGCGCAGGCT
AACGCCTATG CCGAGGAGCA AAAATCCGCT GAGCAAGCAA AGCAAAGCGT TGGCGCCAAA
GAAGCTCCAG AGCAAAATGC GCAAGATAAA CAAGAAGCTG CTATGAGTGA ATCTGTCGAA
GCGCCGCCAA CCAATAGCGA ACCGCTTCCC GCAGAAATGC AGCGAGCACT GAGGGGAGTG
AGTGAAGACC CTCAAGTGTT GCTTCGCAAC AAAATGCAGT TGGAATATCA AAAACGCCGT
CAAAATGGCC AAATATCAAA GGATAACGAA CAGTGGTGA
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| Protein sequence | MSLHFIRPEW LLALVPLALV LLSLWRQHES HSAWNRYIAP HLAKILVTQG SKKSRRPLHL
LAFTWLMATF ALAGPAVNKQ SLPVFAAEQG RVLVMDMSVS MFATDLAPNR LTQAKFRATD
LLRNLKEGET GLVAFAGDAF TISPLTRDTG TLLNLLPTLS PEIMPVRGSN LAAGLTQAKT
LLAQGGHIRG DIIVMTDGIT AAQFDDANSA LSGTQYRLAV VAFGTSQGAP IRLPDGQLQR
DSSNEVVVAS TDFGLLQKLA ADNKGVLIQN RTDGNDLAQL QHWLSDTGDA KATDLDGETW
QDLGPYLALL LLLPALFSFR QGIVASVGFA TLIGGLLLAA APQPAHASVW DNVWKTTDQQ
AMQAYQSQDY ANAAKQFESP QWRGSAQYKA GDYEQALKTF EQDSSAQGLY NQGNALMQLG
KPDKAKERYQ AALEKQADFP AAKANLELAE KQLKQQQKQQ GKNDQQDKNQ DQQGDQQSGD
SNSGDQQSGD QQSGNQQSQD KQQSDQDSAQ KDKQDQAGQE PQEQQDNANP EQSSEQQKAD
EQQSEQDKQN GNAQDKQDEA QQDPAKDKAQ QDQQAKQQNA EQDAKDNSPV DNEAKMQAQA
NAYAEEQKSA EQAKQSVGAK EAPEQNAQDK QEAAMSESVE APPTNSEPLP AEMQRALRGV
SEDPQVLLRN KMQLEYQKRR QNGQISKDNE QW
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