| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2836 |
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| Symbol | truA |
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| ID | 5754614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | - |
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| Start bp | 3375478 |
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| End bp | 3376263 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641289147 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_001555262 |
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| Protein GI | 160875946 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0418534 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00932261 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCGGATTG CATTAGGTAT TGAATATGAC GGCAATGGTT ATTTTGGCTG GCAACGTCAG
GCCGAAGTCG ATTCAGTACA AGCGCAATTA GAACGGGCGT TATCGATAGT GGCCAACGAA
CCTATCGGCG TTTTCTGCGC TGGCCGTACC GATGCGGGCG TGCATGCCAC GGGCCAAGTG
GTTCATTTTG AAACCAATGC CATTCGTAAT GAAGGCGCAT GGACCTTAGG GGTGAATGCC
AATTTGCCCG ATAATATTGC CGTGCGTTGG GTTAAAGAAG TCGACGACAG TTTTCACGCG
CGCTTTTCGG CTACCGCCAG ACGCTACCGT TATGTGATTT ATAATCACAG TTTTCGCCCT
GGAATTTTAC GCCATGGTGT CAGCCATTAT CACGGCGATA TTGATGCAGA CAGAATGCAC
CAAGCGGCGC AGGCACTCTT AGGTGAGCAA GATTTTACCA GCTTTCGCGC AGTCCAGTGC
CAGTCAAAAA CGCCGTTTCG TAATGTACAT TGCGTCAATG TTACGCGCCA AGGCATGTAT
GTGATTGTTG ATATCGCCGC CAACGCCTTT TTACACCACA TGGTGCGCAA TATCGTCGGT
TCATTATTAG AAATCGGTTT AGGCAATCAG CCGCTGACGT GGATGGGTGA TTTGCTCGCG
TTAAAAGACA GAAACCAAGC CGCAGCGACG GCTAAACCCC ATGGGCTCTA TTTAGTTGAT
GTGACTTATC CAGAACAATA TCAATTGCCT AAGCTCGCCC TTGGGCCATT ATTCATGTTG
GATTGA
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| Protein sequence | MRIALGIEYD GNGYFGWQRQ AEVDSVQAQL ERALSIVANE PIGVFCAGRT DAGVHATGQV
VHFETNAIRN EGAWTLGVNA NLPDNIAVRW VKEVDDSFHA RFSATARRYR YVIYNHSFRP
GILRHGVSHY HGDIDADRMH QAAQALLGEQ DFTSFRAVQC QSKTPFRNVH CVNVTRQGMY
VIVDIAANAF LHHMVRNIVG SLLEIGLGNQ PLTWMGDLLA LKDRNQAAAT AKPHGLYLVD
VTYPEQYQLP KLALGPLFML D
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