Gene Sbal195_2579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_2579 
Symbol 
ID5754338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp3053649 
End bp3054605 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content48% 
IMG OID641288873 
Productauxin efflux carrier 
Protein accessionYP_001555007 
Protein GI160875691 
COG category[R] General function prediction only 
COG ID[COG0679] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000223779 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0899714 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAATA TCGTTGAGCA GTTGCTGTTT TCTGCCTCGA TTACGGGTCC AATCTGTTTG 
ATGTTAGCGC TCGGTGTGAT CCTAAAACGC ACCCAAATCA TCAATGAAAA CTTTATTGAT
GTCGCATCAA AATTAGTCTT TAACGTGACG CTGCCAGCCT TGCTGTTCCT TAGCATTATT
AGCTCCAATC ACGATCTCGC CTCCAGTGCG CCCTTAATTG GCTATGGTTT AGCGGCCAAT
TTCCTGTTTT TTATACTCTC CACCTATGCA ACTGGACGGC TATTTCCCAA GCACAAAGAC
CAAGGCGTGA TCATTCAAGG GGGATTCAGG GCCAATACCG CGATTATCGG CTTAGCTTAT
GTTTCCAACG CCTACGGCAG TTCTGGTGTT GCTTTAGCTG CGGTTTATGT CGCCTCGATG
ACGCTGCTCT ACAATATTCA AGCGGTTATT TGCCTAAGCC CTAAAGGCGA AGAATCCAGC
CAACGCGCAT TTGGCGTGAT TATTAAAACC ATTACTAAAA ACCCGCTGAT CATTGCCATT
ATGGTCGGCA TGTTGTTCTA TTTACTTGCT ATACCAGTAC CGAAAATGGT GCTCGATGCG
GGCCAATACT TTGCCAATAT GACCCTGCCC TTGGCGCTAC TGTGCACCGG CGGTTCGCTC
GATATTGGTT CACTCAAACA TGAAAAGCAT TCAACTTGGT TCTCGACCGC ATTGAAACTG
ATCTTTGCCC CGCTTTTTAT CACGGTTGGG GCCTTGCTGT TGGGCTATCG AGGGATTGAG
TTAGCGCTGG TCTTTTTAAT GAGTTCTGCG CCCACCGCAG CCGCAAGCTA TGTGATGGCA
CGCGCCATGG GTGGCAACGC CACCCTTGCG GCCAATATTA TCGCGCTGAC CACAGTCTGC
TCGCTGATCA CGTGCACCTT AGGCATCTTT GTATTGTCCA CTTTGGAGCT AATCTAG
 
Protein sequence
MGNIVEQLLF SASITGPICL MLALGVILKR TQIINENFID VASKLVFNVT LPALLFLSII 
SSNHDLASSA PLIGYGLAAN FLFFILSTYA TGRLFPKHKD QGVIIQGGFR ANTAIIGLAY
VSNAYGSSGV ALAAVYVASM TLLYNIQAVI CLSPKGEESS QRAFGVIIKT ITKNPLIIAI
MVGMLFYLLA IPVPKMVLDA GQYFANMTLP LALLCTGGSL DIGSLKHEKH STWFSTALKL
IFAPLFITVG ALLLGYRGIE LALVFLMSSA PTAAASYVMA RAMGGNATLA ANIIALTTVC
SLITCTLGIF VLSTLELI