Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_2579 |
Symbol | |
ID | 5754338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 3053649 |
End bp | 3054605 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641288873 |
Product | auxin efflux carrier |
Protein accession | YP_001555007 |
Protein GI | 160875691 |
COG category | [R] General function prediction only |
COG ID | [COG0679] Predicted permeases |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000223779 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0899714 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAAATA TCGTTGAGCA GTTGCTGTTT TCTGCCTCGA TTACGGGTCC AATCTGTTTG ATGTTAGCGC TCGGTGTGAT CCTAAAACGC ACCCAAATCA TCAATGAAAA CTTTATTGAT GTCGCATCAA AATTAGTCTT TAACGTGACG CTGCCAGCCT TGCTGTTCCT TAGCATTATT AGCTCCAATC ACGATCTCGC CTCCAGTGCG CCCTTAATTG GCTATGGTTT AGCGGCCAAT TTCCTGTTTT TTATACTCTC CACCTATGCA ACTGGACGGC TATTTCCCAA GCACAAAGAC CAAGGCGTGA TCATTCAAGG GGGATTCAGG GCCAATACCG CGATTATCGG CTTAGCTTAT GTTTCCAACG CCTACGGCAG TTCTGGTGTT GCTTTAGCTG CGGTTTATGT CGCCTCGATG ACGCTGCTCT ACAATATTCA AGCGGTTATT TGCCTAAGCC CTAAAGGCGA AGAATCCAGC CAACGCGCAT TTGGCGTGAT TATTAAAACC ATTACTAAAA ACCCGCTGAT CATTGCCATT ATGGTCGGCA TGTTGTTCTA TTTACTTGCT ATACCAGTAC CGAAAATGGT GCTCGATGCG GGCCAATACT TTGCCAATAT GACCCTGCCC TTGGCGCTAC TGTGCACCGG CGGTTCGCTC GATATTGGTT CACTCAAACA TGAAAAGCAT TCAACTTGGT TCTCGACCGC ATTGAAACTG ATCTTTGCCC CGCTTTTTAT CACGGTTGGG GCCTTGCTGT TGGGCTATCG AGGGATTGAG TTAGCGCTGG TCTTTTTAAT GAGTTCTGCG CCCACCGCAG CCGCAAGCTA TGTGATGGCA CGCGCCATGG GTGGCAACGC CACCCTTGCG GCCAATATTA TCGCGCTGAC CACAGTCTGC TCGCTGATCA CGTGCACCTT AGGCATCTTT GTATTGTCCA CTTTGGAGCT AATCTAG
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Protein sequence | MGNIVEQLLF SASITGPICL MLALGVILKR TQIINENFID VASKLVFNVT LPALLFLSII SSNHDLASSA PLIGYGLAAN FLFFILSTYA TGRLFPKHKD QGVIIQGGFR ANTAIIGLAY VSNAYGSSGV ALAAVYVASM TLLYNIQAVI CLSPKGEESS QRAFGVIIKT ITKNPLIIAI MVGMLFYLLA IPVPKMVLDA GQYFANMTLP LALLCTGGSL DIGSLKHEKH STWFSTALKL IFAPLFITVG ALLLGYRGIE LALVFLMSSA PTAAASYVMA RAMGGNATLA ANIIALTTVC SLITCTLGIF VLSTLELI
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