| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2505 |
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| Symbol | |
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| ID | 5754264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | - |
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| Start bp | 2955788 |
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| End bp | 2956516 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641288799 |
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| Product | RNA methyltransferase |
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| Protein accession | YP_001554933 |
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| Protein GI | 160875617 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0565] rRNA methylase |
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| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000223047 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.027536 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAAGTA ATATTCGAGT GGTTTTAGTG GGGACTTCGC ACCCCGGCAA TATTGGTTCC
ACTGCCAGAG CGATGAAGAC TATGGGTCTG TCAAATCTGT ACCTTGCAGA ACCGCGTGTT
GAACCCGATG GGCATTCCAT TGCATTAGCC GCGGGTGCAT CGGATATTCT GAAACATCTT
GTGAAAGTGG ATTCACTTGC TGAAGCGATT GCCGATTGTA GTCTAGTGAT CGCAACCAGC
GCGCGTAGTC GTACCTTAGA TTGGCCGATG TTAGAGCCAA GAGAAGCAGG GGTGAGATTA
GCGACCGAGG CACTTAAAGG CCCCGTTGCA ATCGTGTTTG GCCGTGAGAA CCACGGGTTG
AGCAATGAAG AGTTGCAACA GTGCACTTAT CATGTGGCGA TTCCTGCAAA TCCTGAATAC
AGCTCGCTCA ATCTTGCGCA AGCAGTACAA ATCATTTGTT ATGAAACCCG TGTTGCCCAC
CTCGCACAAA AAGAAGTGGC CGAAGAAGAG CTGACGGAGT ATCCCTTGGC GGCCGATCAG
GAACGTTTCT TTGCACACCT TGAGACGACA CTGCTATCAA CCGGCTTTAT CATTAAGAAT
CATCCCGGAC AAGTGATGAT GAAACTGCGC CGCTTGTTTA GCCGCGCACG GATTGAGAGT
CAGGAGATGA ATATCCTCAG GGGTATTTTG ACCTCTATTG AGAAAGTGAC GGGTTCTAAA
GACAAATAG
|
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| Protein sequence | MLSNIRVVLV GTSHPGNIGS TARAMKTMGL SNLYLAEPRV EPDGHSIALA AGASDILKHL
VKVDSLAEAI ADCSLVIATS ARSRTLDWPM LEPREAGVRL ATEALKGPVA IVFGRENHGL
SNEELQQCTY HVAIPANPEY SSLNLAQAVQ IICYETRVAH LAQKEVAEEE LTEYPLAADQ
ERFFAHLETT LLSTGFIIKN HPGQVMMKLR RLFSRARIES QEMNILRGIL TSIEKVTGSK
DK
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