| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2441 |
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| Symbol | |
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| ID | 5754200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 2888170 |
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| End bp | 2888853 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641288735 |
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| Product | hemolysin III family channel protein |
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| Protein accession | YP_001554869 |
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| Protein GI | 160875553 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
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| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGAGTC AAAGTGTTAT CGAACAACAA AACCCAGCTA AAAACCCTGC TAAGCCTGGG
CCGTATAGTA TTAAAGAAGA AATCGCTAAT AGCGTATCCC ATGGCTTAGG CGTCATCGCA
GGCATAGTGG CATTGGTACT GATGTTACTC AAAGGGCAAG ATCATCTAAC GCCAATTCAA
CTAACAGGCG TTGCCATTTA TGGTGCGAGC ATCATTGTGC TTTTTCTATG CTCGACCTTA
TACCACAGCG TTAGCCATTC AGGCTGGAAA CATAAACTTA AGATCGCCGA TCACTGCGCA
ATTTACTGTT TGATTGCAGG AACTTACACA CCTTTGATGC TGATAAGCCT ACAGGGGACG
CAATCGATAG TGATTTTAAC GGCGATTTGG TCGCTTGCGA TTGGTGGGAT CCTATTTAAG
ACGCTATTTA TTCACAAATT CAAAATGTTA AGCTTAGTCT TGTATCTCGC CATGGGTTGG
CTATGTGTCA CTGTGATGGG CGATTTAACG GCGGCCATGT CGGAGTTAGG TTTTAATCTA
TTGATCTTAG GCGGATTATT TTACACTTTA GGTGTTGTGT TCTACGTCGG GAAACGTATT
CCATTTAACC ATGCCATTTG GCATTTGTTT GTGCTTGGCG GTGCCATGAG TCACTTTCTG
TGTATTTATC TGACTGTTAT TTAA
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| Protein sequence | MSSQSVIEQQ NPAKNPAKPG PYSIKEEIAN SVSHGLGVIA GIVALVLMLL KGQDHLTPIQ
LTGVAIYGAS IIVLFLCSTL YHSVSHSGWK HKLKIADHCA IYCLIAGTYT PLMLISLQGT
QSIVILTAIW SLAIGGILFK TLFIHKFKML SLVLYLAMGW LCVTVMGDLT AAMSELGFNL
LILGGLFYTL GVVFYVGKRI PFNHAIWHLF VLGGAMSHFL CIYLTVI
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