| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2408 |
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| Symbol | nrdB |
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| ID | 5754167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 2844124 |
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| End bp | 2845284 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641288702 |
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| Product | ribonucleotide-diphosphate reductase subunit beta |
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| Protein accession | YP_001554836 |
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| Protein GI | 160875520 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0208] Ribonucleotide reductase, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0099136 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000013878 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | GTGGATCCCT ATCCATTGGA AAATAGCACC ATGGCCTACT CTACCTTCTG TCAAACACCC
AACGATGCCA CCCGTGAACC TATGTTTTTA GGTCAATCGG TCAACGTGGC TCGTTACGAT
CAACAAAAAT ATGAAGTGTT CGAAAAACTG ATAGAAAAGC AGTTATCTTT CTTTTGGCGC
CCGGAAGAAG TAGACGTCAG TCGCGATAAA ATTGACTACG GTGCATTGCC CGATCATGAA
AAACACATCT TTATTTCTAA CCTGAAATAC CAAACCTTAC TCGACTCGAT TCAAGGTCGC
TCACCCAATG TGGCCTTTTT ACCACTGGTG TCGCTGCCTG AACTAGAGAC TTGGATTGAG
ACTTGGTCTT TCTCTGAGAC GATTCACTCG CGCTCATACA CCCATATTAT TCGCAATATC
GTTAACGATC CTTCAGTGAT CTTCGACGAT ATCGTCGTGA ACAAAGAAAT ATTAAGCCGT
GCGACAGATA TCGCCGCTTA CTACGATCAC TTGATCCAAC TGACTCAAGT GTTCCATTTA
CTCGGCGCGG GTACCCATGT TATCGATGGC AAAGAAGTCA TAGTCAACAC TCGTACCCTG
AAAAAAGCCT TGTACCTGTG CATGATGTCA GTCAACGCCC TAGAAGCGAT TCGTTTCTAT
GTTAGCTTTG CCTGCTCATT TGCCTTTGCT GAACGTAAGC TAATGGAAGG TAACGCGAAA
ATCATTCGCC TGATTGCCCG TGATGAAGCA CTGCACTTAA ACAGCACTCA GCATATTTTA
AGCATCATGC AAGGCGGTAA AGACGATCCA GAAATGGGTG AAATTGCTGC AGAATGCCAA
CAGGAAGCCT TCGATTTATT CTTCAAGGCC GCAGAGCAAG AGAAAGAATG GGCAAAATAC
CTGTTCAAAG ACGGCTCTAT GATAGGTTTG AATGAACAGA TCCTCTGCCA ATACGTTGAG
TTTATTACGA ACCAACGGAT GAAGTCGGTG AACCTGCCGC AACCTTATCC TGAAATAACC
AATCCATTAC CTTGGATGAA AAACTGGTTA GAAAGCGATG CAGTGCAAGT CGCGCCTCAG
GAAGTGGAAG TGTCTTCATA CCTTGTCGGT CAAATTGACT CAGCGGTTGA TGGCGATGAA
TTCCTCGACT TCGATCTCTA A
|
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| Protein sequence | MDPYPLENST MAYSTFCQTP NDATREPMFL GQSVNVARYD QQKYEVFEKL IEKQLSFFWR
PEEVDVSRDK IDYGALPDHE KHIFISNLKY QTLLDSIQGR SPNVAFLPLV SLPELETWIE
TWSFSETIHS RSYTHIIRNI VNDPSVIFDD IVVNKEILSR ATDIAAYYDH LIQLTQVFHL
LGAGTHVIDG KEVIVNTRTL KKALYLCMMS VNALEAIRFY VSFACSFAFA ERKLMEGNAK
IIRLIARDEA LHLNSTQHIL SIMQGGKDDP EMGEIAAECQ QEAFDLFFKA AEQEKEWAKY
LFKDGSMIGL NEQILCQYVE FITNQRMKSV NLPQPYPEIT NPLPWMKNWL ESDAVQVAPQ
EVEVSSYLVG QIDSAVDGDE FLDFDL
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