| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2392 |
|---|
| Symbol | |
|---|
| ID | 5754151 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 2823210 |
|---|
| End bp | 2823905 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641288686 |
|---|
| Product | orotidine 5'-phosphate decarboxylase |
|---|
| Protein accession | YP_001554820 |
|---|
| Protein GI | 160875504 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
|---|
| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000113777 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.00000908556 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGACGACTA AACCTATCCT CGTAGCGCTT GATTACGATA ACAAAAACCA CGCTTTACAA
CTGATAGAAA AACTCGATCC CAACATGTGC CGCCTTAAAG TCGGCAAAGA AATGTTTACC
CTGTTTGGCC CGCAACTGGT GAAAGATATC CATGAACGTG GCTTTGATTT GTTCCTCGAT
TTGAAATTTC ACGATATTCC CAATACTGTC GCCAAAGCCG TGGCCGCTGC CGCAGAGCTG
GGTGTATGGA TGACGAACGT CCATGCCAGT GGTGGTTTAG CCATGATGGA AGCGGCCAAA
AAGGCCTTGC TGCCATACGG CGACAATGCG CCTATGCTGA TCGCTGTGAC GGTATTAACC
TCCATGAGTG ATGATGATCT TAAATTACTC GGCATCAATG TGCCTGCGTT TGAGCATGTG
CAACGTTTAG CTAAGCTGAC CCAGCAAGCA GGACTCGACG GCGTGGTGTG TTCAGCCCAA
GAAGCAACAG CGTTAAAATC ACTGTTAGGT AAGGACTTCA AACTCGTGAC GCCGGGGATC
CGCCCAGTTG GTAGTGATGC TGGCGATCAA CACCGGGTGA TGACGCCGCC TCAAGCGATT
GCAGCGGGTT CAGATTACCT AGTGATTGGC CGTCCAATCA CTAAAGCCGC CGATCCGTTA
GCGGCATTGC AAGCGATTCA CCAATCATTG GCATAG
|
|---|
| Protein sequence | MTTKPILVAL DYDNKNHALQ LIEKLDPNMC RLKVGKEMFT LFGPQLVKDI HERGFDLFLD
LKFHDIPNTV AKAVAAAAEL GVWMTNVHAS GGLAMMEAAK KALLPYGDNA PMLIAVTVLT
SMSDDDLKLL GINVPAFEHV QRLAKLTQQA GLDGVVCSAQ EATALKSLLG KDFKLVTPGI
RPVGSDAGDQ HRVMTPPQAI AAGSDYLVIG RPITKAADPL AALQAIHQSL A
|
|---|
| |