| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2367 |
|---|
| Symbol | |
|---|
| ID | 5754126 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 2790193 |
|---|
| End bp | 2790477 |
|---|
| Gene Length | 285 bp |
|---|
| Protein Length | 94 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 641288661 |
|---|
| Product | SpoIIAA family protein |
|---|
| Protein accession | YP_001554795 |
|---|
| Protein GI | 160875479 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00979283 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAATA TTAAAGTTAT TTCATTGCCA GAGCGCTTTG ACTTTTATTA CCACAAGAAA
TTTACCAGTG ATTATCAAGA GATGTTAACC CTCCCAGAGG TTAATCATAT TATTTTAGAT
TTTAGCCGAG TGCTTTATTT GGACAGTTCT GCTTTAGGCA TGATGGTACT GCTGCATCGA
AAGGCGCAGG AATTACATAT TTCAACATCT GTCAAAGGGG CACATGGACA GGCGAATGAA
ATCCTAGACA TCGCCAATAT GCAGAAAATA TACATCATAG AGTAA
|
|---|
| Protein sequence | MSNIKVISLP ERFDFYYHKK FTSDYQEMLT LPEVNHIILD FSRVLYLDSS ALGMMVLLHR
KAQELHISTS VKGAHGQANE ILDIANMQKI YIIE
|
|---|
| |