| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2358 |
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| Symbol | |
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| ID | 5754117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 2779120 |
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| End bp | 2780760 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641288652 |
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| Product | response regulator receiver modulated diguanylate cyclase |
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| Protein accession | YP_001554786 |
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| Protein GI | 160875470 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTTG AAGATTCGTT AGAGCAACTT AAACGACAGT TTTTACATGC ACTGCCGGAT
AAAAAGAAAC AAATCATTAC CTTGTGGATT TCATTGCGTA AGAATTGGAA TGCACACATG
CTGTCTGCTG TGTATCGCGA GGTGCATAAC TTAAAAGGGT CGAGCGAGAC CTTTGGATTG
TCGGAGACCA AACACATAGT CGATAAACTT GAGCTGCAGC TTAAAGGGTT GCTCAATGCG
CCAGCTCCCG AACTTCCTAC TATCAAAGGC TTAGATACCC TCTTCCACCA GTTGTTGCAA
AACAATATGC GCGGTCAACC GTCGCCGCCT GTGGTAGAGG CGCAAATGCA GCAAAGTCCC
TATAAACCGG CTAAGGCGCG GCATGATCAC CATATTGCCA TCATAGAAGA CGATGGTAAT
GTCGGCGCAA TGATCACAAA GCAACTGCGA GAGTTCGGTT TTAGTGTGCA GCATTTTTTG
AATTTCACGA GCTTTCTGGT GGTGCAAAAT GAAACGCCCT TCGATCTTAT TCTATTGGAT
TTAATTCTGC CCGATTGGAC TGAAGAGGCC TTGTTCGAAG CCGCCACTGA GTTTGAGAAG
AACAATACCC GAGTGTTTGT TTTATCCTCG CGGGGTGATT TTGACATGCG GTTGCTGGCC
ATTCGTGCCA ACGTTAGCGA ATATTTTGTC AAACCTGCGG AAACCACTTT ATTGGTGCGC
AAAATCCATC AATCTCTCAA GATGTCAGAG AAGCAGCCCT TGAAGGTGTT ACTGGTGGAT
GATCAACAGT CTATGGTGGA TTATTTTTCA AGCCTGTTAC GCAGTCACGG TTTGATGGTG
AAAGGGTTAT CGAGCGCCGA GCAAGTTTTG CCTGCCCTTG AACAGTTTGA GCCTGATCTG
TTCATCTTCG ATTTATACAT GCCTGAGGTG AACGGGCTTG AGCTGGCAAA GATGATACGC
CAACTGGATA AATACACCTC TAGCCCAATT CTCGTGTTGA GCTCTGACGA TACCATGCAG
AATAAAGTCA GCATCATACA AGCGGGATCA GATGACTTAA TTTCAAAGCA AACTGCGCCG
AGCTTATTTG TCGCGCAAGT GATATCCCGC GCCCAACGTG GCCATGATAT TCGCAGTTCG
GCAAGCCGCG ACAGCTTAAC GGGATTGTTA AACCATACCC AGATTCTGGT TGCCGCGAGG
CGCTGCTATA ACGTGGCGAG GCGAATTAAC TCTCAGGTTT GTATCGCCAT GTTCGATTTG
GACCACTTCA AAAAAGTGAA CGACACCTAT GGCCATGCCG GTGGTGACAA GGTGTTGCTG
GCCTTTGCCC ATCTATTACA ACAATCCTTA CGGCAAACTG ACTTTACCGG TCGCTATGGC
GGCGAGGAAT TTATGTTAGT GCTGCCAGAT ATGCAAAAAC CATTGGCAAT AGCTAAGTTA
AATGCGATCC GCGAGAGCTT TAGCCATATT GTCTTTGTCG AAGATGGCGT CGAGTTTAAG
GTGACGCTCA GCGGCGGTTT AGTGTTCTCG GACGAATGTG AGGAGTTTCA AGATTGTCTA
TTACTGGCAG ATAAAAACCT TTACGAGGCG AAACGTTTAG GCCGAAATCA ATTAGTGGTT
TCACCAAGTG AGCAGGAATG A
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| Protein sequence | MSFEDSLEQL KRQFLHALPD KKKQIITLWI SLRKNWNAHM LSAVYREVHN LKGSSETFGL
SETKHIVDKL ELQLKGLLNA PAPELPTIKG LDTLFHQLLQ NNMRGQPSPP VVEAQMQQSP
YKPAKARHDH HIAIIEDDGN VGAMITKQLR EFGFSVQHFL NFTSFLVVQN ETPFDLILLD
LILPDWTEEA LFEAATEFEK NNTRVFVLSS RGDFDMRLLA IRANVSEYFV KPAETTLLVR
KIHQSLKMSE KQPLKVLLVD DQQSMVDYFS SLLRSHGLMV KGLSSAEQVL PALEQFEPDL
FIFDLYMPEV NGLELAKMIR QLDKYTSSPI LVLSSDDTMQ NKVSIIQAGS DDLISKQTAP
SLFVAQVISR AQRGHDIRSS ASRDSLTGLL NHTQILVAAR RCYNVARRIN SQVCIAMFDL
DHFKKVNDTY GHAGGDKVLL AFAHLLQQSL RQTDFTGRYG GEEFMLVLPD MQKPLAIAKL
NAIRESFSHI VFVEDGVEFK VTLSGGLVFS DECEEFQDCL LLADKNLYEA KRLGRNQLVV
SPSEQE
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