Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_2346 |
Symbol | |
ID | 5754105 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 2766523 |
End bp | 2768442 |
Gene Length | 1920 bp |
Protein Length | 639 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641288640 |
Product | integral membrane sensor hybrid histidine kinase |
Protein accession | YP_001554774 |
Protein GI | 160875458 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.15581 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTTA AATACAGTGC TTGCATCAAT ATGTTCAGTG GCTTATGGGT CACAATATTA GTGCTGTGGC TAACCTTGTC CCACTCGCTG TATGAGTTTG ACGCTATTTA CGATAAAAAG GCGCAGGCGG TTTTTACTTC CTCGCGGGAT ATGTTCATAC AACATAAGAT CATGTTGGAT GCGCTGAAAT CTTTTTTCCA CGCGTCGAGT AAGGTGACGT CAGAGGAGTT TGAGATTTTT GCCAAGGATT TACTTAAGAT CAAATCTGCC GTCGCTTTTA CGCTGACCCC CAGTCTTGAA CTGGCCTATA TCTCAGATCA GACTATGGCT ACTGAGCTTA AACAGTTTGA GCTAGTCAAG GAGCCTAAAG GGGAGCTTAA GGCGAGCCTT GCCAATTACA CTTTGGCTGT GGTGGCCATT GATAAGCCTA ATATGCCTTA TCTCGTTTAT GCCGTTTCTC ATCAGCGGAT ACTCGCGCGA ATCGAACAAG AGCAGGGCGT TTGCATTACC TATCAATTTG AACAGTCATT TGAGCAGTCG TTACTGCAAA ACTCATTCTG TAATCTTAAG TTAGCCAGCG GCCTATTTTC ATTATTTAAT TACTCTGATA GCCAAACCTT AGCTATCCCT GAATATCAAA CCCGAGTGAG TTTACAGGTA CAATATCAAG TGCCGCAAAA AGAAATTATC GAGCTTATCG TGATCATCCT ACTGATTGCA GCCCTTGGCA TAGTTTTGTC CTTCCTTTTG TACTTTAAGT CTAAAAATCA GCAGGTTGTT GAGCAAATTA AGCTCGACAA TCGCGCTAAA TTAGCCGTGC TTTCGAGCAT TAATCATGAG ATCCGCACCC CAATCAATGC CATTCTTGGC TATAGTCGCA TGCTAAAAAA AGCCCTCTCA CAACCACAGG AACTGGATAA AATCGTCGAT AAAATGGCCT GGTCTGCCAA CTTACTCTAT TCGGTTGCCG AAAATACCTT AAATTACAGT AAGGCAGAAG CTGGGCAGTT AAAACTGAAT TTACATTCGG TGAACTTACA CGAGTATGTG GGCAATATTC AGGACTATTA TCGTGCATTT AGTGCAACCT CCGGCAAACG TTTACACATT GTAGTAAGTG AGTCTTTGCC GCAGTTTATC GAACTCGATG GGACTAAGTT ATTCCAACTC ATGACCAACA TTATCAATAA TGCGTTCAAA TACAGTACGG GTAGCGAAGT GCATTGCTAT ATGGATTTAC ACCTTAAAGC GAATGCTAAA AATCAGCGCC CTGTGCTTAG GGTGCTGATC CGCGATTTTG GCGATGGTAT GTCAAAGGAA GCGCAGCGCG CTTTAGTCGA TCCCTTTATG CACGCCGCTA ACTCACCTAT TGCCGCGACA TCGGGTATGG GACTCGGGCT CTATACGTGT AATCGATTGC TTGAGCAGAT TGGCGGTCGG TTTAGGCTGC GCAGTCAAAA GGGCAAAGGT ACCACAGTGT TACTGCATTT CCCCTGTCAG CTCAGCGTAG TGAAAGAACG ATTAACACTT CAATATGATC AACAAAAAGT GCTGATCATA GATGACAATC TGTTTAATCT TGAAATTTGT CGCGCCATGC TGGAGCACTA TCATTTTCAA ACCTTCAGTA CTGATAATAC AGAGCAAGCA CTGAAGATGT TGGTTAACCA TTTGCCACAG ATTGTCATTG TGGATTACCG TTTACAAGGA ATGAACGGTT TACAACTAGT CAGGCAGATG CAGCAAGTAT TACAAAGCCT GGAGAGTAAT AGCCCTATTG AACATCAGTG TCGTTTCTTT TTGCTCTCCG CGAATGACTG CGATGATATT CCCGAGTTAG CGTCGTTTCC TGAGGTGCAT TTCATGCAGA AACCATTTAG TGCCGAAGTC TTTCTCAGCA AATTAGCGGT AAAAGAGTAA
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Protein sequence | MSVKYSACIN MFSGLWVTIL VLWLTLSHSL YEFDAIYDKK AQAVFTSSRD MFIQHKIMLD ALKSFFHASS KVTSEEFEIF AKDLLKIKSA VAFTLTPSLE LAYISDQTMA TELKQFELVK EPKGELKASL ANYTLAVVAI DKPNMPYLVY AVSHQRILAR IEQEQGVCIT YQFEQSFEQS LLQNSFCNLK LASGLFSLFN YSDSQTLAIP EYQTRVSLQV QYQVPQKEII ELIVIILLIA ALGIVLSFLL YFKSKNQQVV EQIKLDNRAK LAVLSSINHE IRTPINAILG YSRMLKKALS QPQELDKIVD KMAWSANLLY SVAENTLNYS KAEAGQLKLN LHSVNLHEYV GNIQDYYRAF SATSGKRLHI VVSESLPQFI ELDGTKLFQL MTNIINNAFK YSTGSEVHCY MDLHLKANAK NQRPVLRVLI RDFGDGMSKE AQRALVDPFM HAANSPIAAT SGMGLGLYTC NRLLEQIGGR FRLRSQKGKG TTVLLHFPCQ LSVVKERLTL QYDQQKVLII DDNLFNLEIC RAMLEHYHFQ TFSTDNTEQA LKMLVNHLPQ IVIVDYRLQG MNGLQLVRQM QQVLQSLESN SPIEHQCRFF LLSANDCDDI PELASFPEVH FMQKPFSAEV FLSKLAVKE
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