| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2280 |
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| Symbol | |
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| ID | 5754036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 2702054 |
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| End bp | 2702854 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641288571 |
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| Product | type III secretion protein SpaR/YscT/HrcT |
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| Protein accession | YP_001554708 |
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| Protein GI | 160875392 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4791] Type III secretory pathway, component EscT |
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| TIGRFAM ID | [TIGR01401] type III secretion protein SpaR/YscT/HrcT |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.102149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.65037 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACTC AGCTACCCAA CCTATTAACA GCACAACTTC CGGTGTTGGC ACTCTGTATG
ATGCGCCCTT TAGGCATGAT GCTGCTATTA CCCTTATTTA AAGGGGGGGC AATGGGGAGC
GCATTAATTC GTAATAGTCT GATTTTAATG TTTGCTTTAC CTACTGTGCT GGCAATGGAT
GAAATGCAGC CGATACTGCA GCAGGCCGAC ACTTGGATGC TCATCAGCCT ATTTGGCAAA
GAAATTATTG TAGGCATGTT ACTCGGTTTC TGTGCCGCCA TTCCCTTTTG GGCCATAGAT
ATGGCGGGAT TTGTAATTGA CACAATGCGG GGGGCATCCA TGTCGACTGT ACTTAACCCA
TTGATGGGAC TGCAATCATC GATTTATGGC ATGCTGTTTA CTCAAGTTCT TACTGTGCTG
TTTTTAGTCT CGGGTGGTTT TAATTTTCTG CTAACTGCAC TTTATCAGTC ATATCAACAA
TTACCCCCAG GATTTAATTT AACGCTAAGC CAGCCCTTGA TGGTGTTTAT AGCCCATGAG
TGGCAATTGA TGTGCCAACT ATGTCTCAGT TTTGCCATGC CCGCCATGGT GATTATGATC
TTAGTCGATG TAGCCTTAGG GCTAGTAAAC CGCTCGGCGC AGCAGTTAAA CGTCTTCTTT
TTGTCTATGC CCATTAAAAG CGCTTTGGTC TTACTGTTAT TGATCTACAG CTTACAGTTT
GCTTTGTCCC ATTACCTGCA GACCATTTCT GGGGTAGAGC AGCACGTAGA TATTTTGTTT
GGACTCTTAG CAGGGCACTA G
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| Protein sequence | MTTQLPNLLT AQLPVLALCM MRPLGMMLLL PLFKGGAMGS ALIRNSLILM FALPTVLAMD
EMQPILQQAD TWMLISLFGK EIIVGMLLGF CAAIPFWAID MAGFVIDTMR GASMSTVLNP
LMGLQSSIYG MLFTQVLTVL FLVSGGFNFL LTALYQSYQQ LPPGFNLTLS QPLMVFIAHE
WQLMCQLCLS FAMPAMVIMI LVDVALGLVN RSAQQLNVFF LSMPIKSALV LLLLIYSLQF
ALSHYLQTIS GVEQHVDILF GLLAGH
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