Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_2160 |
Symbol | |
ID | 5753910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 2567583 |
End bp | 2568179 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641288446 |
Product | rhomboid family protein |
Protein accession | YP_001554589 |
Protein GI | 160875273 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0175034 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACACGCA GTCCCTATTG GGTCGCGCTG GTGGTGAGTC TGATATGTGC GGGTTTGTAT GTCGCAGGCT TAGCCAGTCC TGCTGTCGAC AACCTACTCG CCTATCGCCG CAGTGCAATT AGTGAGGGTG AATTGTGGCG CTTAATCAGC GGTAATTTAC TTCACACGAA TCAGTGGCAC CTATTGATGA ATCTTGCGGG TCTGTGGGTT GTGCTGTTTT TGCATCATTT CCACTACCAT CTCAAAAGCT TAAGCGCACT ATTCCTGGTA TTATGCTTAC TCGAAGGCAT AGGCTTATAT TTGGGCTATC CGCAATTGCT CGGTTATGTC GGCTTAAGCG GCATGTTGCA CGGCCTATTC GCCTACGGCG CGGTGCAGGA TATTATCCGC AAGCTACGTT CAGGCTATCT GCTGTTACTT GGTGTTATCA TTAAAGTCGG CCACGAACAG CTTTATGGCG CCAGCAATGA TGTCACCGCC ATGATAGGCG CGCGTGTGGC AACCGAGGCG CATTTAGTTG GCTTAATCTG TGGGCTGATT TGTGCTTTAG CGGTATTCAT CACGTTGAAG TTTCACCACG TAAAATCCGC CGCTTAG
|
Protein sequence | MTRSPYWVAL VVSLICAGLY VAGLASPAVD NLLAYRRSAI SEGELWRLIS GNLLHTNQWH LLMNLAGLWV VLFLHHFHYH LKSLSALFLV LCLLEGIGLY LGYPQLLGYV GLSGMLHGLF AYGAVQDIIR KLRSGYLLLL GVIIKVGHEQ LYGASNDVTA MIGARVATEA HLVGLICGLI CALAVFITLK FHHVKSAA
|
| |