| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2076 |
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| Symbol | |
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| ID | 5753821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | - |
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| Start bp | 2469446 |
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| End bp | 2470612 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641288358 |
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| Product | glycine betaine/L-proline ABC transporter, ATPase subunit |
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| Protein accession | YP_001554506 |
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| Protein GI | 160875190 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
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| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.545092 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAAATTAC TTGAACAAGG GAAAAGCAAA GAAGAGATTT ACGAACAAAC AGGGCTGACG
GTTGCCGTAC AAGGTGCCAG CTTTAGCGTA AATAAAGGTG AGATTTTTGT CGTTATGGGG
CTATCCGGCT CAGGAAAATC AACCCTAGTA AGAATGTTAA ACAGGCTCAT TGAACCCACA
TCGGGAGAGG TGTTGGTTGA TGGCCAAAAT ATCCTCAACA TGAATAAGGA TGAACTGGTC
AGGTTTCGCA GAAGTAAAAC CAGTATGGTG TTTCAATCCT TCGCGCTTAT GCCCCATCAA
ACAGTGTTAG AGAATGCCGC ATTTGGCCTC GAACTTGATG GCATGGATAA AAAACAGCGT
GAAGAACGAG CCCTAGATGC TTTAAAACAA GTCGGACTCG AAGGTTTGGA GAAGGCCTAT
CCCAATGAGT TAAGTGGCGG TATGCAGCAG CGAGTAGGAT TAGCGCGAGG CTTAGCGGTA
GATCCTGATA TCTTGCTCAT GGATGAGGCA TTTTCGGCGC TTGATCCGCT TATCAAGACA
GAGATGCAAG ATGAACTGCT GAAACTGCAA GATCGTCATG AGCGCACCAT CATTTTTATC
TCCCATGATT TAGACGAAGC ATTACGGATT GGCGACCGAA TTGCCATTAT GCAGGGCGGC
AGAGTGATTC AGGTGGGGAC GCCGGAAGAA ATCCTGCAAA ATCCCGCGGA TGATTATGTA
CGTGCATTTT TCCGTGGTGT GGATCCAACC GGTGTTATCT CCGCTGGGGA CATTGCCCGC
GACAGTCAGC CAACGGTCGT TTGGCATACT AAAGCCGGTA GCCCACGCGC CACCCTAGAA
ATGTTAAGTA TTAAAGATCG CGAATTTGCC TATGTACTTG ACTCAGAACA CCGCTTTTTA
GGTGTGGTCT CTTCAGACTC CCTGCGCGAC GCTGTTGACC AAGGAAATGG TGCTAGCAAA
CTTGAGCATG CTTTTCTGAC AGACGCTAAA TCAGTTCAAG AAACAGATAG CCTTCAGGAT
ATCTTACCCT TGGTCGCCTC CCATGCTTGG CCTATTCCAG TTGTAAACTC AGAAAGTAGA
TATCGCGGCG TTGTTTCTAA AAATCTGTTT CTTCGTACCT TAAACCGTGC AGAAAAGGGG
ACGTATTTTG AGCAGTCAAC ATCTTAG
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| Protein sequence | MKLLEQGKSK EEIYEQTGLT VAVQGASFSV NKGEIFVVMG LSGSGKSTLV RMLNRLIEPT
SGEVLVDGQN ILNMNKDELV RFRRSKTSMV FQSFALMPHQ TVLENAAFGL ELDGMDKKQR
EERALDALKQ VGLEGLEKAY PNELSGGMQQ RVGLARGLAV DPDILLMDEA FSALDPLIKT
EMQDELLKLQ DRHERTIIFI SHDLDEALRI GDRIAIMQGG RVIQVGTPEE ILQNPADDYV
RAFFRGVDPT GVISAGDIAR DSQPTVVWHT KAGSPRATLE MLSIKDREFA YVLDSEHRFL
GVVSSDSLRD AVDQGNGASK LEHAFLTDAK SVQETDSLQD ILPLVASHAW PIPVVNSESR
YRGVVSKNLF LRTLNRAEKG TYFEQSTS
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